Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00516 ATGTTCAGATGGAGGAGTGAGAAACACAGGGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGATGCTTTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGATAACTACGAGATTGGAGAAAGCAGCAGTTCGTGGTGGAGTTTGTAGATGGGAAAATCCTGTCTACGAAACAGTGAAGTTTGTTCAGGAGCCAAAGACTGGGAAATTCAGTGAGAGATTATATCATTTTGTGGTTTCAACGGGGTTATCGAAAGCTAGCTCCTTTGGGGAAGTTTCTGTAGACTTTGCTGAGTATGCTGAGGCTACAAAGCCCTCCACTGTCGCTCTTCCCATCAAGAATTCTCATTGTGATGCTGTCTTGCATGTATCAATCCAGAGACTACAAGAAAATAATGATAAAAGAGAGGAAGAGGATTGTGAAGATGCCAAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTAAGCAATGGAGAGATAGATGCAAGCCCTAAAAGTGATTCTTCTGAGGATGTGTCTGCCAAAGCAAACACCAATGGAGCTGCATTGAGTGCTGATTGTAGAACATCTAGTGGATCTGACATTACATTGTCAAGTTCTGATGGCAGTTCTGGACTTGATACACCCCGAGAAAATGGACTAAGAAATGGTGGCATCCACCCCAACAATGGTTTTCTTTCAGATGTCAGCCACCCTTCAGAGCCCCAAAAACCTGCTGTAAATGCCTCTGCAGCAATGTATGATATTCATCAGAGATCACACTGGGACTGGTCAGCTGGCTCAGAACATGGTTTGAGTACAGACGGTTCAACTAATGGTTCTCAGGATGCGCTTCCTAGGGAAAGATCCCATCAGGCATCTGATATGGAAATTGAAAGACTTAAGGCTGAACTCGCTGCATTGGCCAGGCAGGCAGATGTGTCAGACTTGGAACTACAGACTCTTAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATCATTAGCTTGAAAGAGGAAAGAGATGCACTCAAGATTGAATGTGACAATCTCAGATCTTTTCGCAAACGAATGGAGGAGGCCAAAGTGAGTAGCATGCCTCAATTAGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAGACAAGAATTGAGGTATGAGAAGGAGCTGAATGCAAATCTCCAATTACAGTTAAAGAAGACACAAGAAGCAAATGCTGAACTAGTTCTTGCCGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGGAAATGTGTAGTCTTTCCAACAAACATGAAGAGGGTAAAAACTCCCATGAATTAGGGGGAAAGCTCTCTAATTGTGAAACAGATGATGAAGAACAGAAAGAATTGGAAGAGCTAGTTAAGGAGCACAGCAGTGCCAAGGAGACTCACTTACTTGAGCAAAAGGTTATAGATCTCTTTGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCACGATATTGCATATAAGCTGGAACAAAGTGAACTGCAAGAACAATTAAAAATGCAGTATGAATGCTCATCTCCTCCTCATGCTGTTGATGAAATTGAAGCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAGTCAGAAGAATTCTCAAATTCTCTGGCTACCATCAAGGAACTTGGAACCCAAATCAGCAGATTAGAGGAGGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGATCTAGATGCCGTGACACGTGACAAAGTTGAGCAGGAGCAAAGAGCCATCCGCGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAATGCTAACACTGCTGAGAGGCTTCAAGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCAAATGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGCGCAGAAAAGACTAGTGGAAGCAATGCTGCTAAAAGTCAATGAAGAGCTTCAGTCAGCCAAAGCTGATTATGAGGTAAAACTGAATGAACTTTCCAACAAAATAGACATGATGGCAGTTCAAAAACAACAGATGTTGTCAGAAATTGAGGACAAGTCCAATCAGCTTGAAAATCAGCAGATGCACGAGGAACAAGTTAGTAGGGATTTCTCTGAAGAGATCCAGATGCTAAAAGCAGAAAATGCAAGGCTTAAAGTGGAGATATCATGCCTCTCTGAGCAAGTAGAACAAAAAGAAATGTTAAGAAATGACTTGGAGCTTATGAAGAAATCACTTGAGGAATCTGAGGCTCGGTTACAGAGTAGAACGGTGGAAAGAAATGAGCTGGTGAGTGAAATTGCTTTGTTGAAGAAGGAAGCAGAAAGGTCACTTGATGAGTTAAATAGGATGAAGCATCTCATGGATGAAAAAGAGACGGCAAGTAGAGTCTTGCAGTCAGAGTTAGAAGCACTTAGAGCTCAATATAGTGACTTGAAAAGTGCTCTTATTGACGATGAGGCTGAGAAAGAAAATCTAAGAAAGCAAGTTTTCCAGCTAAAGGGTGAACTAAAGAAGAAGGACGACGCATTAACCAACATCGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAGCTTTCTGATGGAACTAAAACCAATATGAAGAACAAAAAAAGTGCTCCAATTCCTCAGAGTACAAAAGAAATGGCAAGTCTGAGGGAGAAAATAAAAACGCTTGAGGGCACGATAAAGTCCAAGGAAACTGCTTTGGAAATGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATCCAAAATTGAGGAACTGGAGGACAAAGTGGAGGAGTTCAATCAGAGCATTGCTTTGCAAAAGGTTGATGAGGATAAGAGTACTACTCATCTCAATGATACTACACACATGTCTCAAGAAAGTGGTGTTGCAGTTTCATTGTTCAAGAGTAATGCGTGTTTGTCAGAGAAAGAAGAAGAAATATCCACAATGGAGAATAATGGGGGTGGCAGCAACCTTTTTGACACTTTAGCCGAATTATCGTTGTTGAAGGAAAGAAACAACTCAATGGAAACGGAACTGAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCTGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTAAGAAACCTCAAAAATGCCCGGAAGGCCCAACAATGA 3279 0.4184 MFRWRSEKHRVKAVFKLHFHVTQMVQSGVDALVLSIVPGDIGKITTRLEKAAVRGGVCRWENPVYETVKFVQEPKTGKFSERLYHFVVSTGLSKASSFGEVSVDFAEYAEATKPSTVALPIKNSHCDAVLHVSIQRLQENNDKREEEDCEDAKLKPNDRSLRTYLSNGEIDASPKSDSSEDVSAKANTNGAALSADCRTSSGSDITLSSSDGSSGLDTPRENGLRNGGIHPNNGFLSDVSHPSEPQKPAVNASAAMYDIHQRSHWDWSAGSEHGLSTDGSTNGSQDALPRERSHQASDMEIERLKAELAALARQADVSDLELQTLRKQIVKESKRGQELSKEIISLKEERDALKIECDNLRSFRKRMEEAKVSSMPQLDSGDLCTLVEEIRQELRYEKELNANLQLQLKKTQEANAELVLAVQDLDEMLEQKNREMCSLSNKHEEGKNSHELGGKLSNCETDDEEQKELEELVKEHSSAKETHLLEQKVIDLFGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKMQYECSSPPHAVDEIEAHIQNLENQLKQQSEEFSNSLATIKELGTQISRLEEELEKQAQGFEADLDAVTRDKVEQEQRAIRAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRAQKRLVEAMLLKVNEELQSAKADYEVKLNELSNKIDMMAVQKQQMLSEIEDKSNQLENQQMHEEQVSRDFSEEIQMLKAENARLKVEISCLSEQVEQKEMLRNDLELMKKSLEESEARLQSRTVERNELVSEIALLKKEAERSLDELNRMKHLMDEKETASRVLQSELEALRAQYSDLKSALIDDEAEKENLRKQVFQLKGELKKKDDALTNIEKRFKDSNGRTQLSDGTKTNMKNKKSAPIPQSTKEMASLREKIKTLEGTIKSKETALEMSASSFLEKERELQSKIEELEDKVEEFNQSIALQKVDEDKSTTHLNDTTHMSQESGVAVSLFKSNACLSEKEEEISTMENNGGGSNLFDTLAELSLLKERNNSMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNARKAQQ 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00516 1092 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Pumo6g00516 1092 Coils Coil 294 356 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 165 220 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 897 920 - -
Pumo6g00516 1092 Coils Coil 462 482 - -
Pumo6g00516 1092 Coils Coil 387 435 - -
Pumo6g00516 1092 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1089 - -
Pumo6g00516 1092 Coils Coil 1039 1073 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 165 251 - -
Pumo6g00516 1092 Coils Coil 670 796 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 273 290 - -
Pumo6g00516 1092 Coils Coil 496 523 - -
Pumo6g00516 1092 Coils Coil 916 943 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 268 297 - -
Pumo6g00516 1092 Coils Coil 553 626 - -
Pumo6g00516 1092 Gene3D - 816 1014 - -
Pumo6g00516 1092 MobiDBLite consensus disorder prediction 890 923 - -
Pumo6g00516 1092 Coils Coil 948 982 - -
Pumo6g00516 1092 Coils Coil 800 883 - -
Pumo6g00516 1092 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00516 Pumo-Chr6 6382585 6388211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00516 - - gmx:100819574 1843.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00516 6 6382585 6388211 Pumo6g00516 6 6382585 6388211 ECH
Pumo8g02299 8 60223370 60228821 Pumo6g00516 6 6382585 6388211 PCT