Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00515 ATGGCCAAGGTTTACCCTCAGATACCCACATCTCCTGAGACTCACTGCCTCACCTCCAAAAGAGAAACATACACTCTATGGTTGAAATCACTTGTCTTCCACTCCAACGGTTGCACTGTCTATGACTCAAATGGTGACATCGTTTATCGAGTTGATAACTATGACAGAAAGGGCAGAAGAGAAGTTAATCTCATGGATCTACGAGGCAAAGTTCTCTGCACCATAAAGAAGAGATTACTAGCTCTTGGATGCTGGGAAGGCCACAGATACATCGGTTCTGATTTTGGTACCCAGGAACAACCATGGTTTCAAGTTAAAAGATGTAATCAAATGATCAAAGGGAAAGTAGCTTGCCAAATTTCTGTGGGGTGCCAAAAATACAGCATAGTAAGAATCAGTGGCAAAACAGAAGCATTTAGGATAGTGAACATCGATGGACAAATAGTCGCCGAGGCAAAGCAAAAGCACTCACCCTCAGGTGTTGTACTAAGTAACGATGTTCTAACGTTGGATTTGGCTGCCGGCACAGATCATTCACTTATAATGGCTTTGGTCACAGTATATGGATTGATATGCGGGATAATGTAA 588 0.4252 MAKVYPQIPTSPETHCLTSKRETYTLWLKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLALGCWEGHRYIGSDFGTQEQPWFQVKRCNQMIKGKVACQISVGCQKYSIVRISGKTEAFRIVNIDGQIVAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLIMALVTVYGLICGIM 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00515 195 Pfam LURP-one-related 13 187 IPR007612 -
Pumo6g00515 195 PANTHER - 22 192 IPR007612 -
Pumo6g00515 195 SUPERFAMILY Tubby C-terminal domain-like 15 192 IPR025659 -
Pumo6g00515 195 Gene3D - 13 193 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00515 Pumo-Chr6 6375717 6376775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00515 - - pvu:PHAVU_002G287800g 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00515 6 6375717 6376775 Pumo6g00515 6 6375717 6376775 ECH
Pumo8g02300 8 60244539 60245482 Pumo6g00515 6 6375717 6376775 PCT