Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00511 ATGGAAGAAGAGAGTCAAATAACAAAAGGAAAATATGCTGCTGATATTTCTTCCATAAAAGAAGCACATGCCAGAATAAAATCATTGGTTCATAAAACTCCGCTTCTGTCCTCCAGCTCTCTGAATGCTATGTCAGGAAGGAAGCTCTACTTTAAATGTGAATGTTTACAAAAGGGTGGAGCTTTTAAATTTAGGGGAGCCTGCAATGCTGTGTTCTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGGTTTGCTACGTGCAGTAATGCTAGATGTTTCTTTTTCTTAATCAGATTGTATAAAGCTCTTCTGATTGTGTTCTACAAAATCAGTGGAAACCATGCTGCAGCATTGGCTTTGGCTGCAAAACTACGGGGGATCCCTTCATATATTGTTATTCCAAAAAATGCCCCAACTTGCAAAGTTGAGAATGTAAAGCGGTATGGTGGTCAGGTTGTCTGGTCTGAGACCTCCGTTCAATCAAGGGAAGAAGTTGCAAACAAGGTGTGGAAAGAAACTGGTGCTATCTTTATACATCCTTATAATGATGGACGGATATTAAGTGGCCAGGGTACCATATCCTTGGAGATTCTAGAACAAGCCCCACAAATAGATACGCTAGTGGTACCCATAAGTGGTTTGTTCACTTTTTTGCTCTCAAGTTGTCAACCAAAATGCTGTAAAAATTTGCATCAATTTCAACATCTGCTTCTTGATTTTCCAACAAATGAAACTGCAGGTGGTGGTTTGATATCTGGAATAGCATTGGCTGCCAAGTCCATTAACCCAGCTATTCGTATTTTTGCTGCTGAACCTAAAGGTGCTGATGATGCAGCACAATCTAAAGCAGCTGGGAGGATAATAAGATTGCCGGAGACCAATACTATAGCTGATGGACTTCGAGCATTTCTTGGAGATTTCACTTGGCCTGTAGTACGAGATCTTGTTGAGGACATTATAACTGTTGAAGACAGTGAAATAATAAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACTTTCCAGAAAAACCCTGCTTGGAAGGATTGCAACCATATAGGAATAGTAGTTTCAGGAGGCAATGTTGATCTGGCCATGCTTTGGGATTCTTTGAACAAAGGAAAGTGA 1194 0.4037 MEEESQITKGKYAADISSIKEAHARIKSLVHKTPLLSSSSLNAMSGRKLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSRFATCSNARCFFFLIRLYKALLIVFYKISGNHAAALALAAKLRGIPSYIVIPKNAPTCKVENVKRYGGQVVWSETSVQSREEVANKVWKETGAIFIHPYNDGRILSGQGTISLEILEQAPQIDTLVVPISGLFTFLLSSCQPKCCKNLHQFQHLLLDFPTNETAGGGLISGIALAAKSINPAIRIFAAEPKGADDAAQSKAAGRIIRLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDLAMLWDSLNKGK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00511 397 FunFam Threonine dehydratase catabolic 107 186 - -
Pumo6g00511 397 Gene3D - 235 392 IPR036052 -
Pumo6g00511 397 Gene3D - 63 186 IPR036052 -
Pumo6g00511 397 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 25 385 IPR036052 -
Pumo6g00511 397 Gene3D - 19 225 IPR036052 -
Pumo6g00511 397 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Pumo6g00511 397 CDD Thr-dehyd 16 385 - -
Pumo6g00511 397 Pfam Pyridoxal-phosphate dependent enzyme 251 365 IPR001926 -
Pumo6g00511 397 Pfam Pyridoxal-phosphate dependent enzyme 29 218 IPR001926 -
Pumo6g00511 397 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 3 87 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00511 K12235 - gmx:100799758 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00511 6 6344218 6347825 Pumo6g00511 6 6344218 6347825 ECH