Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00501 ATGGTGGAATCAATTGCTGCAACTTCACTCCTTGGCCACCGTCCAATTTGTGGTGGAAATTTATCCAGGGATGTATCTGTTAAACGCAAATCTTTGAATACTGTTCGGTTCCCAACAACTGAGTTTCTTGGTGGTGGAAGAATTGTGGTTTCTCTGGCTTTGCCTAAATCGAATAAACATGATAGCTTCAGGTTTTCATCAATTAAGGCCTTGGCTGTGGAGTTAACAAGAGAAGCACATGCTTATAGGGAAGAGAAAATGCCCAATAGGGATAACAAGATTGATAGTGGATTTGATCAAAGGCCTGATTTGTGGCCTCCGGCGAATAGAGCGGATAACCCATCGCTGCGGAATCCGTTGCTTCGGCATGAGAGGATGGGATGTGGTTGGTTGGGTGCCATATTTGAGTGGGAGGGTGTTCTAGTTGAAGACAACCCTGATCTAGAGAAGCAGGCTTGGCTGGCACTCTCTCAGGAAGAAGGCAAACCCTCTCCTCCTGCTTTTATCCTCAAGAGAATAGAAGGGATGAAGAATGAACAGGCGATTTCGGAAGTGCTGTGTTGGTCGAGGGATCCGGCACAATTGAGAAGAATGGCTAACAGAAAGGAAGAAATTTACCAAGCTTTGCAGGGTGGGATATATAGACTCATGTCTGGGTCCAAGGAGTTTGTGAGTGTTTTGATGCATTATAAGATACCAATGGCATTGGTTTCCACGCGGCCTAGGAAGGCTCTTGAGTCTGCTATTGGGGAAATTGGGATTGAGGACACTTTCAGTGTTATTGTAGCAGCAGAGGATGTTCATAGGGGAAAGCCTGATCCAGAAATGTTTGTGTATGCTGCACAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGTAACTCCAATCTAACAGTGGAGGCTGCACATGAAGCGCGGATGAAGTGTGTGGCTGTTGCTAGCAAGCATCCTGTGTATGAGCTTGGGGCTGCAGACTTGGTTGTCAGGCACCTAGACGAGCTTTCAGTGGTCGATTTGAAGAATCTTGCAGACATTGAAATGACTGAGTTTGGGTCTCCGGAGCCTGAGATGGAGATGGAGGTGGAAGAAGATTATGACACATCATCAGTTGATGACAATTTCTGGTAA 1134 0.4594 MVESIAATSLLGHRPICGGNLSRDVSVKRKSLNTVRFPTTEFLGGGRIVVSLALPKSNKHDSFRFSSIKALAVELTREAHAYREEKMPNRDNKIDSGFDQRPDLWPPANRADNPSLRNPLLRHERMGCGWLGAIFEWEGVLVEDNPDLEKQAWLALSQEEGKPSPPAFILKRIEGMKNEQAISEVLCWSRDPAQLRRMANRKEEIYQALQGGIYRLMSGSKEFVSVLMHYKIPMALVSTRPRKALESAIGEIGIEDTFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHEARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIEMTEFGSPEPEMEMEVEEDYDTSSVDDNFW 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00501 377 CDD HAD_BPGM-like 193 316 - -
Pumo6g00501 377 Pfam Haloacid dehalogenase-like hydrolase 150 314 IPR041492 -
Pumo6g00501 377 MobiDBLite consensus disorder prediction 84 111 - -
Pumo6g00501 377 NCBIfam HAD-IA family hydrolase 249 314 IPR006439 -
Pumo6g00501 377 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 377 - -
Pumo6g00501 377 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Pumo6g00501 377 MobiDBLite consensus disorder prediction 356 377 - -
Pumo6g00501 377 SUPERFAMILY HAD-like 133 336 IPR036412 -
Pumo6g00501 377 Gene3D - 133 331 IPR023214 -
Pumo6g00501 377 MobiDBLite consensus disorder prediction 356 371 - -
Pumo6g00501 377 MobiDBLite consensus disorder prediction 84 98 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00501 K22912 - gmx:100798181 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00501 6 6248885 6250781 Pumo6g00501 6 6248885 6250781 ECH