Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00493 ATGGACCCCAAAAACGTGAAATCGGACCTGGTTCTCATTCTCGACTACGGTTCTCAATACACGCACCTTATCACTCGCCGCATCCGCAGCCTCTCCGTGTTCTCCCTCTGCATCTCCGGCACCTCCTCTCTTTCCACCATCGCCGACCTCAACCCCTCCGTCGTCATTCTCTCCGGCGGGCCCCACTCCGTCCACACCCCCGACTCCCCCTCCTTCCCCGACGGCTTCCTCCACTGGGCCCGGTCCAATGGTGTCGCCGTCCTCGGCATCTGCTACGGCCTCCAGCTCCTCGTCCAGCGCCTCGGCGGCGACGTCCGCGTCGGGGACAAGCAGGAGTATGGCCGCATGGAGATTTCTGCCGACAAACCCTCCGCACTCTTCCCCGAGGACAAGCGACAGGTCGTTTGGATGAGCCACGGCGACGAGGCCGTCGTGCTCCCCGATGGATTCCATGTCGTCGCCCGCAGCGACCAGGGCGCTGTCGCCGCCATCGAAAACCCCTCCGCCAAGCTCTACGGCCTCCAGTATCACCCTGAGGTGACGCATACGGAGGAAGGAATGGAGACGTTGCGGCGTTTTCTGTTCGATGTTTGTGGTGTGGAAGCAGGGTGGAAGATGGAGGATGTGATGGAGGAGGAGATCAAGGTGATTAAAGATACGGTGGGGCCTGATGAGCATGTGATTTGTGCTTTGTCTGGTGGTGTGGATTCCACTGTTGCTGCTACTCTGGTGCATAAGGCTATTGGGGATCGGCTTCATTGTGTGTTTGTGGATAATGGGTTGCTTAGGTATAAGGAGAGGGAGCGTGTGGTGGAGACCTTTGAGAAGGATCTTCATTTGCCGGTTGTGTGTGTTGATGCTGTGAATCAGTTTCTTACCAAGTTGAAGGGCGTGGTGGATCCAGAGATTAAGAGGAAGATTATTGGGAAGGAGTTTATTTGTATTTTTGACGCTTTTGCTCAGGAGCTTGAGGGGAAGCTGGGGAAGAAGCCTTCTTATTTGGTTCAGGGGACGTTGTATCCAGATGTGATTGAATCTTGCCCTCCACCTGGAACTGGGAGAACCCATTCCCATACCATTAAGAGTCATCATAATGTTGGAGGTCTTCCAAAAGATATGAAACTGAAGCTTATTGAACCACTCAAGCTTCTGTTCAAGGATGAGGTTCGTCAATTAGGGAGGATCTTGGATGTTCCTGAGGCCTTTCTAAAACGTCACCCATTCCCGGGGCCTGGTCTTGCGGTGAGAGTTTTGGGTGATGTGACTGAAGGAAATGCTTTAGATATTCTCCGACAGGTTGATGAGATCTTCATTCAGGCAATCAAGGATGCTGGGCTCTATGATACAATATGGCAAGCCTTTGCAGTTTTCTTGCCAGTCCGATCAGTTGGAGTTCAGGGTGATCAAAGAACACACTCCCATGTTGTTGCTCTTAGAGCTGTTACAAGTCAAGATGGAATGACTGCCGACTGGTACTACTTTGAGCACAAGTTCCTTGACGATGTCGCCCGAAAGATCTGTAATGGTGTCCGTGGTGTAAACCGTGTTGTGCAAGACATTACGTCAAAGCCACCATCAACAATTGAATGGGAATAA 1596 0.5244 MDPKNVKSDLVLILDYGSQYTHLITRRIRSLSVFSLCISGTSSLSTIADLNPSVVILSGGPHSVHTPDSPSFPDGFLHWARSNGVAVLGICYGLQLLVQRLGGDVRVGDKQEYGRMEISADKPSALFPEDKRQVVWMSHGDEAVVLPDGFHVVARSDQGAVAAIENPSAKLYGLQYHPEVTHTEEGMETLRRFLFDVCGVEAGWKMEDVMEEEIKVIKDTVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERERVVETFEKDLHLPVVCVDAVNQFLTKLKGVVDPEIKRKIIGKEFICIFDAFAQELEGKLGKKPSYLVQGTLYPDVIESCPPPGTGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRILDVPEAFLKRHPFPGPGLAVRVLGDVTEGNALDILRQVDEIFIQAIKDAGLYDTIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVARKICNGVRGVNRVVQDITSKPPSTIEWE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00493 531 Pfam tRNA methyl transferase HUP domain 226 270 - -
Pumo6g00493 531 SUPERFAMILY Class I glutamine amidotransferase-like 9 234 IPR029062 -
Pumo6g00493 531 FunFam GMP synthase [glutamine-hydrolyzing] 205 415 - -
Pumo6g00493 531 FunFam GMP synthase [glutamine-hydrolyzing] 8 202 - -
Pumo6g00493 531 Gene3D - 416 531 - -
Pumo6g00493 531 CDD GMP_synthase_C 226 530 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pumo6g00493 531 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 8 531 IPR022955 GO:0003922|GO:0006177
Pumo6g00493 531 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 204 405 IPR025777 GO:0003921|GO:0005524
Pumo6g00493 531 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 193 425 - -
Pumo6g00493 531 PRINTS Glutamine amidotransferase superfamily signature 55 64 - -
Pumo6g00493 531 PRINTS Glutamine amidotransferase superfamily signature 173 186 - -
Pumo6g00493 531 PRINTS Glutamine amidotransferase superfamily signature 86 97 - -
Pumo6g00493 531 NCBIfam glutamine-hydrolyzing GMP synthase, N-terminal domain 11 200 IPR004739 GO:0003922|GO:0005524|GO:0006177
Pumo6g00493 531 Pfam Glutamine amidotransferase class-I 13 196 IPR017926 -
Pumo6g00493 531 Gene3D HUPs 205 415 IPR014729 -
Pumo6g00493 531 Gene3D - 4 201 IPR029062 -
Pumo6g00493 531 NCBIfam glutamine-hydrolyzing GMP synthase, C-terminal domain 209 531 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pumo6g00493 531 CDD GATase1_GMP_Synthase 11 194 IPR004739 GO:0003922|GO:0005524|GO:0006177
Pumo6g00493 531 PANTHER GMP SYNTHASE-RELATED 9 531 - -
Pumo6g00493 531 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 410 531 - -
Pumo6g00493 531 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 10 203 - -
Pumo6g00493 531 Pfam GMP synthase C terminal domain 440 530 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pumo6g00493 531 PRINTS Anthranilate synthase component II signature 86 97 - -
Pumo6g00493 531 PRINTS Anthranilate synthase component II signature 55 64 - -
Pumo6g00493 531 PRINTS Anthranilate synthase component II signature 11 25 - -
Pumo6g00493 531 PRINTS Anthranilate synthase component II signature 173 186 - -
Pumo6g00493 531 FunFam GMP synthase [glutamine-hydrolyzing] 416 531 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00493 K01951 - gmx:100794993 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00493 6 6165402 6168676 Pumo6g00493 6 6165402 6168676 ECH