Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00486 ATGCCACCTTTTGCAGGCTCCGAACCTGTTGGGTTCCCCAAGCCAGATTCCAACATAGTTTCCATTGACGTGGGTGGCCAACTGTTCCAAACCACGAAACAAACATTAACCTCGGCGGGTCCGAAAACCTTCTTCTCCAGAATTGCGGAATCTTCTGGAATCTACACGCCCTTCATAGACAGAGACCCCGAACTCTTCTCTCTCCTTCTCTCTCTTCTCAGAACCGGTAACCTTCCTTCAAAGGCCAAAACTTTTGATCTCCAAGACCTAATTATCGAGTCTAAATTCTACGGCATCGAATCCCTCCTCATCAATTCCCTCTCCAACCCTTCCCAATTGGAACCCTTCAATCTCCAAAAATCGCTCCTTTTACCCTTGAACGGACGCGATTCCCCCTCCGCCCTCGCCGCCACCGCCTGTGGCGCCCTCCACGTCGCCCACGGCAGCAAAATCACCTCCTTCGACTGGTCCCTCCACCGCAAATCCACCGTCCTCACCCAATTCACCGCCGTGGACTCCCTCCTCGCGCTCTCGCCGGCCCTAGCCGCCGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTCGACCTCGAAAAGGGGCGCGTCAGGGAAACCCTAAATTGGGAAAACGTCACGAAATCCGGCTCCACCGTGCAGGCCATCGGATCCTCGCCGGAAAACATGTTCGTCAGCTTCGAATCCTCGCGGCGGAACTCGAATTCGATAATGGTTTATGATTTGCATACCCTAACCCCCGTCACGGAGATCGGCCACAACGAAATCTTTGGCGCAGACATCGATTCGGCGATTCCGGCGACGAAGTTGCAATGGATTGAGGGTTACAATTTGTTAATGGCTTCTGGGTCCCACAGTGGGCCCTCCGGTGTGAGCGGTAATGTACGGTTGTGGGATGTTCGGTCCGGTAACGTTGTCTGGGAGGCTTCCGAGAAGGTGGATTGTTTTGCTGACGTGGCGGTTTGTGATGCGCTGTCGGTTATTTTTAAGGTTGGGGTCAATTCGGGGGAAGCGTCCTACGTGGACCTGCGGAATTTGAGTAGCGGTGAGAGCGCGTGGGTTTGTCTCGGAGATAAGAGGAAGATTTTGAATGGGAAGAAGGAAGGGTTTGGGTGCAAGATTGAAACGCAGGGGAATCAAGTGTTTTGCACGAAAGGTGGTGACGTGGAGTTGTGGTCCGAGGTTGTAATGGGGTCTGGGAACAGTGGGAGGATCTTCAAGAGAAACTTGATGGGGAGGGTTAGGGATATGGGTGGGGCCAAAATTACCAATTTGGCCTTTGGAGGGAGCACCATGTTCTTGACTAGGAAGGATCAGCAATGTGTTGAGGTGTGGCAGAGTTCTTCTAGGGAATTTTGA 1374 0.5342 MPPFAGSEPVGFPKPDSNIVSIDVGGQLFQTTKQTLTSAGPKTFFSRIAESSGIYTPFIDRDPELFSLLLSLLRTGNLPSKAKTFDLQDLIIESKFYGIESLLINSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAATACGALHVAHGSKITSFDWSLHRKSTVLTQFTAVDSLLALSPALAAAGANDFSGLQILDLEKGRVRETLNWENVTKSGSTVQAIGSSPENMFVSFESSRRNSNSIMVYDLHTLTPVTEIGHNEIFGADIDSAIPATKLQWIEGYNLLMASGSHSGPSGVSGNVRLWDVRSGNVVWEASEKVDCFADVAVCDALSVIFKVGVNSGEASYVDLRNLSSGESAWVCLGDKRKILNGKKEGFGCKIETQGNQVFCTKGGDVELWSEVVMGSGNSGRIFKRNLMGRVRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSREF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00486 457 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 14 454 IPR045068 -
Pumo6g00486 457 Gene3D Potassium Channel Kv1.1; Chain A 13 110 IPR011333 -
Pumo6g00486 457 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Pumo6g00486 457 SUPERFAMILY POZ domain 17 104 IPR011333 -
Pumo6g00486 457 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 181 454 IPR011044 -
Pumo6g00486 457 Gene3D - 135 457 IPR015943 GO:0005515
Pumo6g00486 457 SMART BTB_4 18 114 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00486 Pumo-Chr6 6087601 6089915 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00486 - - gmx:100792189 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00486 6 6087601 6089915 Pumo6g00486 6 6087601 6089915 ECH