Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00484 ATGGCACGGTTGGTTCTGCCATCGAAGACATTGACTTTTTCGAGGAACACTCTACTGGGTTTGATCTCCCCTGCTCCTCTTCAGGTTAATTGCAGCGTTAGCTATTTTCAGAATTCAGCAAGAAGGAGCATCAGATTCAAGCATTTCCTTGCATCAGAGGTCAATTTCCGAAAGAAGTATTGCCCATTATATTCTTCACTACCAAGGGTCAAGCAAGTAAGTAGGAGGCTAATTTGTTCAGTTGCCACAGAGGATTTACAAAAGCAAGGTGAAGAATCTAAAATGGAGACACCTAGGGAAATATTCTTAAAGGATTACAAGATGCCTGATTACTACTTTGACACTGTGGATCTGAAATTTTCCTTGGGAGAGGAGAATACAATAGTTAGTTCTAAAATTGCTGTGTATCCTCGCATTGAAGGTTCTACTCCCCCACTAGTTTTAGATGGACGAGACTTATCTTTAGTTTCAATTCACCTGAATGGCAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGCCATCTCACAATCCGATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACGGAGATTTGCCCACAGAAGAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACAGTTCGCATTGAGGCGGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTAGCTGAGCAAGGTGACTTAGAGGATGGCAGGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTCTTATCTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACATTTATTACCCGTTCAGGGCGGAAGGTGTCCCTTAGGATATGGACACCTGCAGATGATGTACCTAAGACTTCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAACGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAAAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCTACTGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTTACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGTCGTACTGTAAAGCGGATTGCTGATGTTTCAAAACTTAGGAATTACCAGTTTCCACAGGATGCTGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGATGGACAATTTCTACACAGTTACGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTATTAGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGCCAAGCTGTAACATGTGAAGATTTTTTTGCTGCCATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTGCTATGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAATACTTATTATAATCCAGAAGCGCATACTTTTACTTTGAAGATTAGTCAAGAGATACCACCCACTCCAGGGCAATCAGTTAAGGAACCCACGTTCATTCCTGTTGCTGTGGGTTTGCTTGATTCCTCTGGCAAGGACATTCCTCTTTCAACTGTTTATCATAATGGGACTCTGCAATCGGTTTCAAGCAATGATCAGTCAGTCTGCACTACAGTCCTTAGAGTGACCAAGAAAGAGGAGGAGTTTGTATTCACTGATATATTTGAGAGGCCTGTTCCTTCTTTGTTAAGGGGATACAGTGCTCCTATTCGTCTGGAATCTGATCTCACTGATAGCGACTTGTTTTTCTTACTAGCCAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAGTTGATGCTTAACTTGGTTGATGATTTGCAACATAACAAACCATTGGCTTTGAATCCCAATTTTGTTGATGGGTTCAAATGTATTCTATGTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGCGAGGGAGAAATAATGGACATGATGGGGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGGACTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGCACAGTAGAAAATAATAGGAGCTCTGAAGAATATGTCTTCAATCACTCAAACTTGGCCAGGCGTGCTCTGAAGAATGTTGCTCTTGCTTATCTTGGATGCCTTGAGGAACAAAAATTCACTGATCTTGCACTGCACGAGTATAAAACTGCTACAAATATGACCGAGCAATTTGCTGCTTTGGCTGCCATAGCCCAGAACCCTGGTAAAACCCGTGATGATGTTCTTGCTGACTTTTATGGCAAGTGGCAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTGCAAGCAATGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTAAACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTTCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAGGCGTTATGATGAAGACAGACAAAAACTTGCAAAGGCCCAGTTGGAGAGGATCATGTCTACTAATGGACTATCGGAGAACGTGTTTGAGATAGCTTCGAAAAGCTTAGCTTAA 2943 0.4254 MARLVLPSKTLTFSRNTLLGLISPAPLQVNCSVSYFQNSARRSIRFKHFLASEVNFRKKYCPLYSSLPRVKQVSRRLICSVATEDLQKQGEESKMETPREIFLKDYKMPDYYFDTVDLKFSLGEENTIVSSKIAVYPRIEGSTPPLVLDGRDLSLVSIHLNGKALKEEDYHLDARHLTIRSPPSGKYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPADDVPKTSHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVKVNTYYNPEAHTFTLKISQEIPPTPGQSVKEPTFIPVAVGLLDSSGKDIPLSTVYHNGTLQSVSSNDQSVCTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDLTDSDLFFLLANDSDEFNRWEAGQVLARKLMLNLVDDLQHNKPLALNPNFVDGFKCILCDSSLDKEFVAKAITLPGEGEIMDMMGVADPDAVHAVRTFIRKQLASELRSEFLSTVENNRSSEEYVFNHSNLARRALKNVALAYLGCLEEQKFTDLALHEYKTATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWRRYDEDRQKLAKAQLERIMSTNGLSENVFEIASKSLA 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00484 980 Pfam Peptidase family M1 domain 325 533 IPR014782 GO:0008237|GO:0008270
Pumo6g00484 980 Gene3D Neutral Protease Domain 2 377 540 IPR027268 -
Pumo6g00484 980 FunFam Putative aminopeptidase N 293 376 - -
Pumo6g00484 980 FunFam Aminopeptidase N 541 655 - -
Pumo6g00484 980 Pfam Domain of unknown function (DUF3458_C) ARM repeats 658 980 IPR024601 -
Pumo6g00484 980 Gene3D - 292 376 - -
Pumo6g00484 980 Pfam Peptidase M1 N-terminal domain 117 283 IPR045357 -
Pumo6g00484 980 FunFam Puromycin-sensitive aminopeptidase 656 980 - -
Pumo6g00484 980 FunFam Aminopeptidase N 108 291 - -
Pumo6g00484 980 NCBIfam aminopeptidase N 105 979 IPR012779 GO:0008270
Pumo6g00484 980 CDD M1_APN 105 538 - -
Pumo6g00484 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Pumo6g00484 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Pumo6g00484 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Pumo6g00484 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Pumo6g00484 980 Gene3D - 541 654 IPR038438 -
Pumo6g00484 980 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 980 IPR012779 GO:0008270
Pumo6g00484 980 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Pumo6g00484 980 Gene3D - 656 980 IPR037144 -
Pumo6g00484 980 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 548 - -
Pumo6g00484 980 FunFam Aminopeptidase N 377 540 - -
Pumo6g00484 980 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Pumo6g00484 980 Pfam Domain of unknown function (DUF3458) Ig-like fold 541 654 IPR035414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00484 Pumo-Chr6 6054275 6064506 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00484 K01256 - gmx:100775476 1890.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00484 6 6054275 6064506 Pumo6g00484 6 6054275 6064506 ECH