Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00471 ATGAGTACTAGAGGTGAAAGCAGTGGTGGTGGCCAAAGCTCCTTAAATTACCTCTTTGGATCAGAAGAACAGCCAAAGCCTGCGCCCCAAAAGACAGTTTCATATCCATTGCCACCTTATGGAATTGACATCGATAACGATAATCCCCCCACTGGTCATCGTGCCCCTTCTACCAACCAAGTTATTGACCGTTCTCAAGGCCAGCACCTGGGAAACGTTCTCACCGTCATGGATGTGTTGTTATTATTATGTGTTCTCTTGGTTGCTTTGCCAAACCTGGCTGTAGTAGAGAGTCGCAGAGCTCCTGTTCTGGACTACTTTGAGTATTGTGCTATGAGCTGCAGAGCTTACAGTGCCTCATTGGAAGAATTTGGAGGGGTTGGTGATGGAACAACTTTGAATACAAAAGCTTTTCAGGCAGCCATAGATCATCTGAGTCAGTATGCATCAAGTGGCGGGTCTCAACTTTATGTTCCTCCAGGAAGATGGTTAACTGGCAGCTTCAATGTCACCAGCCATTTCACTTTATTCCTACACAAGGATGCTGTGATTCTTGCCTCTCAGGTTTAA 570 0.4579 MSTRGESSGGGQSSLNYLFGSEEQPKPAPQKTVSYPLPPYGIDIDNDNPPTGHRAPSTNQVIDRSQGQHLGNVLTVMDVLLLLCVLLVALPNLAVVESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGRWLTGSFNVTSHFTLFLHKDAVILASQV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00471 189 PANTHER PECTIN LYASE-RELATED 87 188 - -
Pumo6g00471 189 SUPERFAMILY Pectin lyase-like 78 187 IPR011050 -
Pumo6g00471 189 MobiDBLite consensus disorder prediction 1 20 - -
Pumo6g00471 189 MobiDBLite consensus disorder prediction 1 35 - -
Pumo6g00471 189 Gene3D - 117 189 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00471 Pumo-Chr6 5872591 5883620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00471 73 188 Glycoside Hydrolase AT3G61490 57.627 2.58e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00471 - - gmx:100785841 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00471 6 5872591 5883620 Pumo6g00471 6 5872591 5883620 ECH