Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00463 ATGCCTTCTTCTTCAGTTCGCAGACTCACAATGGCAGCGATATCCAACTCCTCCTTCTCACTGAAGCAGGGTTTCTCTCTCGCGCGTCCCCAAACTCCCTTTCTTGCTCGAGCTCCTCCTTCTTCCACTTCCATCAAATTCAGAAGATGTTACGCGGCGTTCGCCAATGAGAATCGCGAGTACGTGATCGTTGGCGGCGGAAATGCCGCGGGGTATGCTGCGCGCACTTTCGTTGAGCATGGAGTGGCTGATGGTCGTCTCTGTATTGTGACCAAAGAGCCATATGCGCCTTACGAGCGTCCCGCTCTGACGAAAGCGTATTTGTTCCCGCCGGATAAGAAACCAGCGCGCCTTCCTGGTTTTCACACTTGTGTTGGATCCGGTGGAGAGAGGCAGGCTCCCGAGTGGTATAAAGAGAATGGGATAGAGATGTTGTATGAAGATCCAGTAAAAGATATTGATATTGAAAATCATACTTTGACAACAAGTTCTGGAAAACTTCTGAAGTATGGTTCGCTTATTATTGCTACAGGATGTACGGCATCAAGGTTTCCAGAGAAAATTGGGGGAAACCTACCTGGTGTTCACTATATCCGAGATGTTGCAGACGCTGATGCACTGATTTTATCATTGGAAAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGTTGGTTGGAAACTTGATACAACAATCATATTTCCAGAAGATCACCTTTTGCAAAGACTGTTTACTCCTTCTCTTGCCCGGAGATATGAAGAACTCTATCAAAAGAATGGAGTCAAAATCTTGAAGGGTGCCTCCATAAAAAATTTGGAAGCTGGTTCTAACGGACATGTAGCTGCTGTGAAACTTGGAGATGGATCTATTGTGGAGGCAGATACGGTAATTATAGGCATTGGAGCAAAACCTGCTGTGAGTCCCTTTGAGAGGGTGGGCCTGAATAGAGATGTTGGTGGTATACAGGTTGATGGTCTGTTTCGGACAAGCACTCCTGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTGAAGATCTATAACCGTATCTCTCGAGTGGAGCATGTAGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGACTATCTTCCATACTTCTACTCGAGGATTTTTGAATATGAAGGGAGCCCTAGAAAAGTTTGGTGGCAGTTCTTCGGAGACAATGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATAGCTACCTTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAGCCCTGAGGAATTTCAACTCCTGCCTAAACTTGCCAGAAGTCAGCCTCTGATTGATAAAGCCAAACTTCAAAACGCAACTTCAGTGGAGGAGGCCCTAGAGATTGCTCGGGGATCCTTGCAAGGCGAAGCCGCTGTCTAA 1488 0.4603 MPSSSVRRLTMAAISNSSFSLKQGFSLARPQTPFLARAPPSSTSIKFRRCYAAFANENREYVIVGGGNAAGYAARTFVEHGVADGRLCIVTKEPYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQAPEWYKENGIEMLYEDPVKDIDIENHTLTTSSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADALILSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSNGHVAAVKLGDGSIVEADTVIIGIGAKPAVSPFERVGLNRDVGGIQVDGLFRTSTPGIFAVGDVAAFPLKIYNRISRVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRIFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPLIDKAKLQNATSVEEALEIARGSLQGEAAV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00463 495 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 374 IPR023753 GO:0016491
Pumo6g00463 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 60 82 - -
Pumo6g00463 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 304 318 - -
Pumo6g00463 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 241 - -
Pumo6g00463 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 344 351 - -
Pumo6g00463 495 SUPERFAMILY FAD/NAD(P)-binding domain 55 381 IPR036188 -
Pumo6g00463 495 FunFam Monodehydroascorbate reductase 394 481 - -
Pumo6g00463 495 Gene3D - 394 480 IPR016156 GO:0016491|GO:0050660
Pumo6g00463 495 PANTHER APOPTOSIS-INDUCING FACTOR 1 59 480 - -
Pumo6g00463 495 Gene3D - 184 311 IPR036188 -
Pumo6g00463 495 Gene3D - 62 377 IPR036188 -
Pumo6g00463 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Pumo6g00463 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 170 188 - -
Pumo6g00463 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 62 81 - -
Pumo6g00463 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 303 319 - -
Pumo6g00463 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 329 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00463 Pumo-Chr6 5806386 5817020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00463 167 393 Acyl Lipid Metabolism Gene Families AT1G48030 26.556 7.08e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00463 K08232 - gmx:100819919 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00463 6 5806386 5817020 Pumo6g00463 6 5806386 5817020 ECH