Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00453 ATGGCTCTGAGCCCTGATCAACAGATCAAGCCCTTAGCTCCATTCATATCATCAACCCAATTCAGCAGACAAGAAGATCTTCAAGACATATCCGAACAGAAAATCATTCGCATAAGAAAGTTCGTGCTGTGCTGCGGTTGTTTCACTGCCCTTGTTGTGATACTTGTGGTCATACTAATAGTCTTGGGCTTCACCGTTTACAATGTCAAAGAACCCGAGGTGAGGATGAATAGCGTTACCCTTATCAGCGGAACTTTCACAAACAGTGCCACTAACAACGTTACACTTGTTGCTGATATCTCCGTGAAGAACACAAACGCTTTCACCTTGAGGTTTGGAAACACCACCACCATTGTTTACTATGATGGTGTTGGAATAGGTGAGGGTTCTTCTCCACCGGGTAAGGCCAAGGCCAGAAGAACCATAAGGGTCAACACGACCTTGGAGATTATGGCAAAGAAGCTTTTGGATATCCCAACTTTGAATAGTGACCTCAGGGATCAAGCTTTGAATATCAGCAGCTATACTAGGATCGATGGTAAGGTCAAAATACTGAACATGTTTCCTAGGAAGGTTGTGGTTGAGATGAATTGTACCATTGGATACAACGTCACTACTGGGTTGGTCACAAATGGTGACAATTGTCTTGCAAACGTTGATATTTAG 666 0.4339 MALSPDQQIKPLAPFISSTQFSRQEDLQDISEQKIIRIRKFVLCCGCFTALVVILVVILIVLGFTVYNVKEPEVRMNSVTLISGTFTNSATNNVTLVADISVKNTNAFTLRFGNTTTIVYYDGVGIGEGSSPPGKAKARRTIRVNTTLEIMAKKLLDIPTLNSDLRDQALNISSYTRIDGKVKILNMFPRKVVVEMNCTIGYNVTTGLVTNGDNCLANVDI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00453 221 Pfam Late embryogenesis abundant protein 100 199 IPR004864 -
Pumo6g00453 221 SMART why 79 201 IPR013990 GO:0009269
Pumo6g00453 221 Gene3D - 58 200 - -
Pumo6g00453 221 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 34 204 - -
Pumo6g00453 221 SUPERFAMILY LEA14-like 53 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00453 Pumo-Chr6 5634192 5635203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00453 - - gmx:100527705 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00453 6 5634192 5635203 Pumo6g00453 6 5634192 5635203 ECH