Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00427 ATGGTGAAACCTCGCTTTAGAGAGTCTATTAAATCTTTGTTTGGAAGTCACATTGACCCTAATAAAGAAGAGCAGCTCCAGGTAGCTAAAGCAGAAATTGAAGACAAAGTGAAAAGGATATTGAAACTTATTAAAGAGGACAACCTTGAAGAGGATGGTAGCCCAGTAGAACTTTCTAAGAAGGAACCGCTTGTTGAACTGATTGAAGATTTCCACAATCAATACCAATCTCTGTATGCACAATATGATCATCTAACAGGTGAGTTAAGGAAAAAGATTAAGGGCAAGCGAGAAAAGGAGAGTTCTTCATCCAGCTCAGACTCAGATTCAGATTCAGATTATTCTTCAAAGGACAAAGACAACAAAAACGGACAACTGGAAAATGAATTTCAAAAGACAATTGATGGCTTAAAGCAAGAACTTGAAGTGGTGCATATAGAAGTGGCTGAATTAAATCGGAAGTTGACAATTACACATGAAGAGAAGCAGGATCTTAATTCAAAATATCTTGCAGCATTGAGCAAGATACAAGAAGCAGACAAAATGAACATGGATTTGAAAACTGATGCTGAAGCATTAGGCACTCAAAGATCAAAACTTTTGGTTGAGAATGCTGAACTAAATAAACAACTGGACGTTGCTGGTAAACTAGAAGCTGAACTGAGTCAAAAATTGGAAGACTTAACGGCAGAAAAAGATAGTTTGACCATGGAGAAGGAAACAGCTCTCCAACAGATTGAGGAGGAAAAGAAGATTACTGATGGCCTGAGAACCCTTGTTGATCAACTGAAAGATGAGAAATTAGCACTTGGCAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCTATTCTGAAACAGCAGTTGGAACATTCAGAACAGCAAATGACAGATATAAGCCACAATCTGAAAGTCGCTGAGGAAGAAAATGAATCTTTAAAAGTGAAACTTTCACGGGCATCAAATGAGGTTCAGCTGGCTCAAAATAGAATACAAGATTTTGTAGCTAAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGTGGAAGAGAAATTTCTGCCCTCACTCAGATGCATGAAGCATATCAGAAAGAATCCTCAAATCAAATCAGGGAACTCGAGGCACAAGTCACAAACCTGGAGCTGGAATTAAAATCACTGCAAAACCAGAAGAGAGATATGGAAGAGCAAATTAAGAGCAGAGCCACTGAAGCAAGGGAACTAGGAGAGCACAATTCAGGACTACGAAACCAAATATCAGAACTTGAAATGAAGTCCAGAGAAAGAGAAGAGGAGCTATCTGCTATGATGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTCTAAAATGTCAGATTTAACATCTCAGATAAACAAGCTACTGGCTGATATAGGCACATTACATGCTCAGAAAAATGAACTGGAAGAGCAGATAATTTCTAAAAGTGATGAAGCTTCGACTCAAGTCAAAAGCATTACAAATGAGGTGAATGCGTTGCAGCAAGAAGTGGAGTCCCTCCAACACCAGAAATCCGACTTGGAAGTTCAGTTAGTGGAAAAAGTCCAAGAAAATTCTGAGTATGTGATTCAAATGCAAACTCTGAAAGAGGAAATTGACAGAAAAATCCTGGAACAAGAGAGACTTCTGGCAGACAGAGAAAATTTAGCCCTGCAGCTAAGGACATTGGAATTAGAGATGAATACTATAAAGAACAAAAACAGTGAAGCTGAAGAGCAAATAAGGGCTAAAAGCCATGAGATCAGTCACATGAGTCAGGGAATGTTGGAGCTACATGACAAAATAGCAGAAATAGAGAAAAAATCAACAGATAGAGAATCACATTTCTTAGTTCTCCAGGATAAGTTTATTAATGCAGAGCAAGCGGTTTCAGCTCAAATAAAGGCCTCCAGTGAACAAATTAAGAATCTTGAACATGATTTGGCGTCCCTGCAGAAGGAGAAACAGGAATTAGAACAGCAATGTGAAAAGCTGAAGTTGGAGGTGGATTCCATACAGAACCAGAAGAGTGAAGTTGAAGAACAAATGAGAGCTAAAGACCATGAGAACTCTGGGCTGAGAGAAGAAAATTTGGGATTGCAGGGAACAGTTACTGTGCTGGAGAAAACATTAGCTGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTGCCTTCACAGTCCAAATTGATAATATAAAACATGATTTGGTGTCTGTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCACACACAACCGGAAGGGAGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACTCTGGGCTGAGAGAAGAAAATTTGCGATTGCAGGGAACAGTTACTGTGTTGGAGAAAACATTAGCAGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCACGAAAAAGAGAGTGAGGCTTCAGCCCAAATAACTGCCTTCACTGCCCAAATTGATAATCTAAAACATGATTCGGTGTTCCTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCATACACAACCAGAAGGGTGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACACCGAACTGAGAGAGGAAATTTTAGGATTGCAGGGAACAATTACTGCACTTGAGAAAACATTAGCTGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTGCCTTCACAGTCCAAATTGATAATATAAAACATGATTTGGTGTCTGTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCACACACAACCGGAAGGGAGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACTCTGGGCTGAGAGAAGAAAATTTGGGATTGCAGGGAACAGTTACTGTGCTGGAGAAAACATTAGCAGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCACGAAAAAGAGAGTGAGGCTTCAGCCCAAATAACTGCCTTCACTGCCCAAATTGATAATCTAAAACATGATTCGGTGTCCCTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCATACACAACCAGAAGGATGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACACCGAACTGAGAGAGGAAATTTTGGGATTGCAGGGAACAATTACTGCACTTGAGAAAACATTAGCTGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTGCCTTCACAGTCCAAATTGATAATATAAAACATGATTTGGTGTCTGTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCACACACAACCGGAAGGGAGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACTCTGGGCTGAGAAAAGAAAATTTGGGATTGCAGGGAACAGTTACTGTGCTGGAGAAAACATTAGCAGAGAAAGAGGCAGAGCTATCCACTTTACAGGAAAAGCTTCACGAAAAAGAGAGTGAGGCTTCAGGCCAAATAACTGCCTTCACTGCCCAAATTGATAATCTAAAACATGATTCGGTGTCCCTGCAGAATGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCATACACAACCAGAAGGGTGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACACCGAACTGAGAGAGGAAATTTTGGGATTGCAGGGAACAATTACTGCACTTGAGAAAACATTAGCTGAGAAAGAGGCAGAGCTATCCACTTCACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTGCCTTCACAGTCCAAATTGATAGTATAAAACATGATTTGGTGTCTGTGCAGAATGAGAAACAGGAATTGGAACAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCACACACAACCGGAAGGGAGAAGTTGAAGAGCAGATGAGAGCTAAAGACCATGAGAACTCTGGGCTGAGAGAAGAAAATTTGGGATTGCAGGGAACAGTTACTGTGCTGGAGAAAACATTAGCAGAGAAAGAGGCAGAGTTATCCACTTTACAGGAAAAGCTTCACGAAAAAGAGAGTGAGGCTTCAGGGCAAATACTTGCCTTCACGGCCCAAATTGATAATCTGCAAAAAGACTTGCTTTCCTTACAGAAAACAAAAGAAGAACTGGAGCTCCACTGTGAAAAAATTAGTGAAGAACATACACAAAGCCTTGTAACGGTAGAGAATGAAAAGAATGACATATCAAGCAGAAGTATGGATCTTACGAGATCACTGGAAGAAAGAGAAGATTCATATCAGAAGTTGAATGAAGAATATAAACAAATTGATAGTTTGTTTAAGGAATGCATGGTCAAACTTGAAGTTGCGGAAAAGAAGATTGAAGAAATGGCAGGAGAGTTTCATAAAGGCATTGAGTCGAAAGATCAGAAGGTAGCTGATTTGGAACATACAGTGGAAGACCTAAAAAGAGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTCGCTTGAGAATGTTCGGATGCTTGAGGTTAAGCTTCGTCTGTCAAACCAGAAGCTCCGGGTCACAGAACAATTGCTGAGTGAGAAGGAAGAAAGCTTTAGGAAGACAGAAGAAAAGTTTCAGCAAGATCAGAGAGCCCTTGAGGACAGGATTGCTACTTTGTCAGCAATAATAACTGCCAACAATGAAGCTTTTGATGAAATTGTCTCTAACCTTAAAGAGTGTGTGAACAGTGTCACGACTGGCACATGA 5007 0.4066 MVKPRFRESIKSLFGSHIDPNKEEQLQVAKAEIEDKVKRILKLIKEDNLEEDGSPVELSKKEPLVELIEDFHNQYQSLYAQYDHLTGELRKKIKGKREKESSSSSSDSDSDSDYSSKDKDNKNGQLENEFQKTIDGLKQELEVVHIEVAELNRKLTITHEEKQDLNSKYLAALSKIQEADKMNMDLKTDAEALGTQRSKLLVENAELNKQLDVAGKLEAELSQKLEDLTAEKDSLTMEKETALQQIEEEKKITDGLRTLVDQLKDEKLALGKELEAVTGELSILKQQLEHSEQQMTDISHNLKVAEEENESLKVKLSRASNEVQLAQNRIQDFVAKSSQLKEKLDESGREISALTQMHEAYQKESSNQIRELEAQVTNLELELKSLQNQKRDMEEQIKSRATEARELGEHNSGLRNQISELEMKSREREEELSAMMKKLEDNENESSSKMSDLTSQINKLLADIGTLHAQKNELEEQIISKSDEASTQVKSITNEVNALQQEVESLQHQKSDLEVQLVEKVQENSEYVIQMQTLKEEIDRKILEQERLLADRENLALQLRTLELEMNTIKNKNSEAEEQIRAKSHEISHMSQGMLELHDKIAEIEKKSTDRESHFLVLQDKFINAEQAVSAQIKASSEQIKNLEHDLASLQKEKQELEQQCEKLKLEVDSIQNQKSEVEEQMRAKDHENSGLREENLGLQGTVTVLEKTLAEKEAELSTLQEKLHEKESEASGQITAFTVQIDNIKHDLVSVQNEKQELEQQCEKLKMELDSTHNRKGEVEEQMRAKDHENSGLREENLRLQGTVTVLEKTLAEKEAELSTLQEKLHEKESEASAQITAFTAQIDNLKHDSVFLQNEKQELEQQCEKLKMELDSIHNQKGEVEEQMRAKDHENTELREEILGLQGTITALEKTLAEKEAELSTLQEKLHEKESEASGQITAFTVQIDNIKHDLVSVQNEKQELEQQCEKLKMELDSTHNRKGEVEEQMRAKDHENSGLREENLGLQGTVTVLEKTLAEKEAELSTLQEKLHEKESEASAQITAFTAQIDNLKHDSVSLQNEKQELEQQCEKLKMELDSIHNQKDEVEEQMRAKDHENTELREEILGLQGTITALEKTLAEKEAELSTLQEKLHEKESEASGQITAFTVQIDNIKHDLVSVQNEKQELEQQCEKLKMELDSTHNRKGEVEEQMRAKDHENSGLRKENLGLQGTVTVLEKTLAEKEAELSTLQEKLHEKESEASGQITAFTAQIDNLKHDSVSLQNEKQELEQQCEKLKMELDSIHNQKGEVEEQMRAKDHENTELREEILGLQGTITALEKTLAEKEAELSTSQEKLHEKESEASGQITAFTVQIDSIKHDLVSVQNEKQELEQQCEKLKMELDSTHNRKGEVEEQMRAKDHENSGLREENLGLQGTVTVLEKTLAEKEAELSTLQEKLHEKESEASGQILAFTAQIDNLQKDLLSLQKTKEELELHCEKISEEHTQSLVTVENEKNDISSRSMDLTRSLEEREDSYQKLNEEYKQIDSLFKECMVKLEVAEKKIEEMAGEFHKGIESKDQKVADLEHTVEDLKRDLEEKGDEISTSLENVRMLEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQRALEDRIATLSAIITANNEAFDEIVSNLKECVNSVTTGT 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00427 1668 Coils Coil 1048 1138 - -
Pumo6g00427 1668 Coils Coil 1354 1395 - -
Pumo6g00427 1668 Coils Coil 742 783 - -
Pumo6g00427 1668 Coils Coil 1555 1589 - -
Pumo6g00427 1668 Coils Coil 1213 1240 - -
Pumo6g00427 1668 Coils Coil 1502 1529 - -
Pumo6g00427 1668 Coils Coil 531 586 - -
Pumo6g00427 1668 Coils Coil 1417 1444 - -
Pumo6g00427 1668 Coils Coil 1150 1191 - -
Pumo6g00427 1668 MobiDBLite consensus disorder prediction 402 433 - -
Pumo6g00427 1668 PANTHER COP1-INTERACTIVE PROTEIN 1 1162 1276 - -
Pumo6g00427 1668 Coils Coil 805 832 - -
Pumo6g00427 1668 Coils Coil 482 523 - -
Pumo6g00427 1668 MobiDBLite consensus disorder prediction 1180 1200 - -
Pumo6g00427 1668 Coils Coil 26 46 - -
Pumo6g00427 1668 Coils Coil 1009 1036 - -
Pumo6g00427 1668 Coils Coil 703 730 - -
Pumo6g00427 1668 MobiDBLite consensus disorder prediction 976 996 - -
Pumo6g00427 1668 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Pumo6g00427 1668 Coils Coil 1252 1342 - -
Pumo6g00427 1668 Coils Coil 1604 1624 - -
Pumo6g00427 1668 Coils Coil 211 477 - -
Pumo6g00427 1668 MobiDBLite consensus disorder prediction 93 125 - -
Pumo6g00427 1668 Coils Coil 134 168 - -
Pumo6g00427 1668 Coils Coil 946 987 - -
Pumo6g00427 1668 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Pumo6g00427 1668 Coils Coil 626 695 - -
Pumo6g00427 1668 MobiDBLite consensus disorder prediction 1384 1404 - -
Pumo6g00427 1668 Coils Coil 844 934 - -
Pumo6g00427 1668 Gene3D - 1061 1198 - -
Pumo6g00427 1668 Gene3D - 857 1055 - -
Pumo6g00427 1668 Gene3D - 1265 1402 - -
Pumo6g00427 1668 Gene3D - 653 790 - -
Pumo6g00427 1668 Gene3D - 367 544 - -
Pumo6g00427 1668 Coils Coil 1449 1483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00427 Pumo-Chr6 5379425 5384590 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00427 - - gmx:100778046 1713.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00427 6 5379425 5384590 Pumo6g00427 6 5379425 5384590 ECH