Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00425 ATGAGGATGGATTCTTTGAAGCAAAAGTTTCCCTTCCTCAAGTTGCTTCTCACAATCTTCTTCCTAGGCCTCGCTTTCCGCCTCCTCTTCTTCCACTCCTTGTCCCCTCAGATTTCCCCAGTTTTGGAATCTCCATTTCCCGAGAAAGTGACATTACCAGAACCTCAAAACCCTCCTCAGACTTCAACTGTTCCAGAACATGTTCCTGAACCCCCACCTGTTGTGGAACCTGTTCCCCAAACTGAAGATCAACCGTTTCCCACAGACTCAGAGAAATGTGATTACTTTAATGGGGATTGGGTCCCGAACCCGTCAGGTCCAGTTTACACTAATGACAGCTGCGACCTCATTGAATCTCATCAAAATTGTTTGAAGAATGGGAGGCCTGACAGAGAGTTTCTGTATTGGAGGTGGGCTCCCAGAGACTGTGATTTGCCTCAGTTTGATCCACAGAGGTTTCTCAACTTGATGCGGAACAAAGCCTGGGCACTCATTGGTGATTCCATTTCCCGCAACCATGTGCAATCGCTGGTCTGCATTCTTTCCAAGGTGGAAAAACCCGTCTTAGTCTACCATGATGAGGAATACAAGTGCAAAACCTGGAACTTTCCCTCGTATAACTTCCGTGTGTACGTTATCTGGTCACCATTCCTTGTGGAAGCTGCTATTTTTGAAGACATAAATGGTGTTTCAAGTTCTGAAGTTGAGCTACATCTCGACAAACTGGACAGTAAATGGACGGATCAGTACCTCGACTTTGATTACATTATTATTTCAACTGGGAAATGGTTTCTCAAATCTGCAATCTACTATGAGAATGACACTATATTGGGCTGCCACTCCTGTCCTAAGAGGAACCTGACAGAGCTGGGGTTTAACTTTGCTTATCGCAAAGCCTTGAAATTTGTCATGAACTTCATAGTGACTTCCAATCACAAAGGGTTGATTTTTTTCAGGACATTCACACCTGATCATTTTGAGAATGGGGAGTGGTTTAGTGGGGGAACTTGCAATAGAACAGCACCAATTAAAGAAGGTGAAATGGAAATGAAATATTTGAACAAGATGCTTCGTGAAATTGAGTTAGAGGAGTTTGGGAAGGCAGCTTCTGAAGCTTCGAGAAATGGGGTGAATTTTAAGCTTGTGGATTTTGCTTCACTTTCACAGTTGAGACCTGATGGGCATCCTGGTCCATACAGGCAATTTCATCCATTTAAAAAGGACAAAAATGCTAAAGTTCAGAATGATTGTCTGCATTGGTGCTTACCTGGGCCTATAGATTCTTGGAATGATATAATAATGGAGATGGTTGTCAATGGGTAA 1323 0.4324 MRMDSLKQKFPFLKLLLTIFFLGLAFRLLFFHSLSPQISPVLESPFPEKVTLPEPQNPPQTSTVPEHVPEPPPVVEPVPQTEDQPFPTDSEKCDYFNGDWVPNPSGPVYTNDSCDLIESHQNCLKNGRPDREFLYWRWAPRDCDLPQFDPQRFLNLMRNKAWALIGDSISRNHVQSLVCILSKVEKPVLVYHDEEYKCKTWNFPSYNFRVYVIWSPFLVEAAIFEDINGVSSSEVELHLDKLDSKWTDQYLDFDYIIISTGKWFLKSAIYYENDTILGCHSCPKRNLTELGFNFAYRKALKFVMNFIVTSNHKGLIFFRTFTPDHFENGEWFSGGTCNRTAPIKEGEMEMKYLNKMLREIELEEFGKAASEASRNGVNFKLVDFASLSQLRPDGHPGPYRQFHPFKKDKNAKVQNDCLHWCLPGPIDSWNDIIMEMVVNG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00425 440 Pfam PMR5 N terminal Domain 91 144 IPR025846 -
Pumo6g00425 440 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 32 433 IPR029962 GO:0016413
Pumo6g00425 440 MobiDBLite consensus disorder prediction 49 89 - -
Pumo6g00425 440 MobiDBLite consensus disorder prediction 51 80 - -
Pumo6g00425 440 Coils Coil 343 363 - -
Pumo6g00425 440 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 436 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00425 Pumo-Chr6 5367592 5370866 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00425 - - gmx:100816814 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00425 6 5367592 5370866 Pumo6g00425 6 5367592 5370866 ECH