Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00414 ATGAAGAGCGAAAGCGAATTGGTTGGACTTTGCATTGAGGCAGCGTGTGAGAGCAGAGAAAGCGTGGATAAATGGCGGATGCAGAGGCGCAGTCTCGATTCCATGCCTTCTCCTCTCGCCGACGCTCTCCTCCGCCGCCTCATCGCCCGCCGTCTCCTCTACCCCTCCCTCCTCGAGGTTTTCAAACATAGTGCCGAAGAGGTTGATGTGAGAGGCGACAACTCCGTGGACGCAGAATGGATGGCTTATTTGGGAGCATTTCGGCACTTGCGCTACTTGAACCTCGCCGATTGTCATCGAATCACCACTTCAGCTGTTTGGCCAATTACAGGAATGACTAGCCTTCAGGAGTTGGATCTATCTAGATGCTTCAAGGTCAACGATGCTGGGATTAACCATATTCTTTCCATTCCTAATCTGGAGAAGTTGCGCATTTCAGAAACAAGCGTCACTGCCAAAGGAGTCAAGCTTCTCGCCTCTCTTAAAAACTTGTCTCTTCTTGACTTAGGTGGTTTGCCGGTAGATGACATGTCATTAACCTCGTTACAGGTACTGAAAGGGCTACAATATATTGATCTCTGGGGTAGTAAAATATCAAACAAAGGTGCTTCTGTTCTCAATACATTCCCAAAGTTGACCTATCTCAATCTTGCTTGGACCAGTGTCACAAAATTGCCTAAATTATCATTTCTTGAATACCTGAACATGAGTAACTGTACTATTGATTCTATACTTGAAGATGATAAAGCTCATTTGGCAAAGCTTATTCTCTCTGGGGCTATGTTCATGAGTGAAGCTGAAGCCTTGTTATATGCAAATACAAACATCCTATCCTTTTTGGATGTAGCCCATTCCAACCTTCACAGATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTCAATCTCAGCTCATGCATGATGGGGGATGATTCAGTTGAGATGGTTGCATGCGCTGGTGGAAACTTGAAAAGTCTGGATCTGAGTGGTACCAGGGTTAGTTCTGCTGGATTAGGGGTTTTAGCTGGACATGTTCCCAATCTTGAAATTCTGTCATTATCTCAGACACCAGTGGATGACACTGCCATCTCATTTATCAGTATGATGCCTTCATTAAAGGATGTTGACCTGAGCAATACAAACATTAAAGGTTTTCTGCACCAAGGAGGGACTGATGTGAACTCCCCGCTCTCTCTAATGGATCTGCAAAATCTTAAATTAGAAAGGTTGAATTTGGAGCATACACATGTTAGGGATGAAGCTTTATACCCTTTGTCAAGCTTCCAAGAGCTGAGATATTTATCTCTTAAAAGTGCTTCACTTGCAGACATTTCACTTTACTATTTATCATCAATTCCTAAATTGACAAATCTTAGTATTTGTGATGCGGTATTGACAAATTATGGGCTTGATATGTTTAAGGCTCCTGAAACTCTGAAACTGCTGGACCTCAGAGGTTGTTGGCTCTTAACTGAAGACACTATCTTGTCATTCTGTAGAAATCATCCACAAATTGAAGTCAGGCATGAACTTGGTACCGGATTTCCTGTCAATCAAAATGGACTTAATCATTCCTCTCCATCTCGATCAACTTCCAGGACTATGGAAATGGCTAAGAAGAAAGATCAAATTCCCATATCTCCATATTTTGTTGATCAAAGATTGAAGTATAGCAGGGATGAGTTACTTGCATTGCAATTTACATCTTTGCCTCTTGCATCTAGTAGTGAGAGTGGGAAATCAATATTTGAAAAACAATTGGATTGA 1770 0.4192 MKSESELVGLCIEAACESRESVDKWRMQRRSLDSMPSPLADALLRRLIARRLLYPSLLEVFKHSAEEVDVRGDNSVDAEWMAYLGAFRHLRYLNLADCHRITTSAVWPITGMTSLQELDLSRCFKVNDAGINHILSIPNLEKLRISETSVTAKGVKLLASLKNLSLLDLGGLPVDDMSLTSLQVLKGLQYIDLWGSKISNKGASVLNTFPKLTYLNLAWTSVTKLPKLSFLEYLNMSNCTIDSILEDDKAHLAKLILSGAMFMSEAEALLYANTNILSFLDVAHSNLHRFFFLSKMKVIEHLNLSSCMMGDDSVEMVACAGGNLKSLDLSGTRVSSAGLGVLAGHVPNLEILSLSQTPVDDTAISFISMMPSLKDVDLSNTNIKGFLHQGGTDVNSPLSLMDLQNLKLERLNLEHTHVRDEALYPLSSFQELRYLSLKSASLADISLYYLSSIPKLTNLSICDAVLTNYGLDMFKAPETLKLLDLRGCWLLTEDTILSFCRNHPQIEVRHELGTGFPVNQNGLNHSSPSRSTSRTMEMAKKKDQIPISPYFVDQRLKYSRDELLALQFTSLPLASSSESGKSIFEKQLD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00414 589 Gene3D Ribonuclease Inhibitor 389 512 IPR032675 -
Pumo6g00414 589 Gene3D Ribonuclease Inhibitor 18 149 IPR032675 -
Pumo6g00414 589 SMART LRR_CC_2 161 185 IPR006553 -
Pumo6g00414 589 SMART LRR_CC_2 113 137 IPR006553 -
Pumo6g00414 589 SMART LRR_CC_2 87 112 IPR006553 -
Pumo6g00414 589 SMART LRR_CC_2 477 502 IPR006553 -
Pumo6g00414 589 SMART LRR_CC_2 321 345 IPR006553 -
Pumo6g00414 589 SMART LRR_CC_2 429 453 IPR006553 -
Pumo6g00414 589 Gene3D Ribonuclease Inhibitor 256 388 IPR032675 -
Pumo6g00414 589 PANTHER - 242 437 - -
Pumo6g00414 589 Gene3D Ribonuclease Inhibitor 150 255 IPR032675 -
Pumo6g00414 589 Pfam Leucine Rich repeat 404 426 IPR001611 GO:0005515
Pumo6g00414 589 Pfam Leucine Rich repeat 88 102 IPR001611 GO:0005515
Pumo6g00414 589 SUPERFAMILY RNI-like 93 508 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00414 - - gmx:100814174 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00414 6 5251305 5256147 Pumo6g00414 6 5251305 5256147 ECH