Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00408 ATGACTCTAAACCTGTGCACTCCATGCTTCTCTCGCCTACTCCACCACCCTTCTTCTTCTTCTTCTCTCCCCAAACTCTCCGAAACCTGCGCCAACACCAACACTCATTTTCCCTCTCCATTTTTCGTCGCTTCCTCACTCCCCAACCAATCGAGGTTCATAAGCACCAAAGCTTCCGTGAGCGAGAGCCAGAATGAAACCTCCGACGACACCGCCAACTTATTGGACCAACAACTCATCCTCCGAGTCGCCGCAACCGCCAAAGACGCCGACGAGGCCTTGCAGATCATCGCCGACAACTCCTCCCGAAACCACGGCGTCGTTTCCACCTCCGATTGCTGCTCCATTATCTCCGCCGCGCTTAACCGCAACAATCCCCAGCTCGCTCTCTCCATTTTCTACGCCATGCGCGCCAGTTTTCATCAAGTTGGCGAGAGTGGTCCTTTGGCTGAGAGATGGAAGTGGTCGAGGCCAAATGCAGATGTTTATACATTGTTGATTCAGGGTTTAGCGGCGGTGTTAAGGGTTTCTGACGCTCTTAGGGTTATTAGATATATTTCTGAAGTTGGCGTTTCTCCTGGTGAGGAGGTTCCTTTTGGGAAGATAGTCAAATGCCCTAGCTGTCGGATAGCTGTTGGTGTTGCACAGCCACAACAAGGTATTCAGATAGTATCTTGTGCAAAGTGTCGTTACCAATACGAACTTGTTTCGGGTGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATTACTGCGTGGGAAAGGGGGTTAAGATACGTGAAACTGATGAAGCAAAGCATTCCTGCTGCTGTTCACTCTATAGTGGTGCAGACCCCTTCTGGTCTGGCTCGCACTCATAGATTTGCAACTGAAACAGTTGATCTGCCAGCACAAGAAGGCGAAAGAGTAACTGTTGCTGTGGCAGCTCCATCAAATGTATATAGAAAGGTGGGCCCCTTTAAATTCAGTCCAAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGGCGGGAATCACTACTGTTAAGAGCTCCAAGAAAAGAAGAAAATTCATCATTATTCAAACCCTCCCTCCTCTTTCCACTTTTTGCTTTGTTGGCTACTGGTGATGCTGCCTCTGGACTTATTGACCCCAGCCTTCCCCAGTTGCTATCAGTTGTTGCAGTTTCAACTCTTGTTGTTGGATCTACAGTGAACACTGTTGTTCTTCCTCAGTTTAATCAGCTTCCACAGAAATCAGTAGAAGCAATTGCAATCAAACAACGACTTTTATCTCAATATGATGTTCTTCTGTCTCGCATCAATGACCTAAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGACTCGGAGAAGTAAAGTCAAAAGGGTGCGAGAGAGCCTGCAAAACTCCCTCAGGGGAAGGATTGAATTGATTGAAAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTCCTTGCTGCTGAAACTGCTAGTAATATGGATAGTATCACCGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAGGAGAGATGGAAAATACAAGCAGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAACCCATGCCTTTGGACGAAGTTTAA 1722 0.4646 MTLNLCTPCFSRLLHHPSSSSSLPKLSETCANTNTHFPSPFFVASSLPNQSRFISTKASVSESQNETSDDTANLLDQQLILRVAATAKDADEALQIIADNSSRNHGVVSTSDCCSIISAALNRNNPQLALSIFYAMRASFHQVGESGPLAERWKWSRPNADVYTLLIQGLAAVLRVSDALRVIRYISEVGVSPGEEVPFGKIVKCPSCRIAVGVAQPQQGIQIVSCAKCRYQYELVSGDIVSIESEEISMDITAWERGLRYVKLMKQSIPAAVHSIVVQTPSGLARTHRFATETVDLPAQEGERVTVAVAAPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESLLLRAPRKEENSSLFKPSLLFPLFALLATGDAASGLIDPSLPQLLSVVAVSTLVVGSTVNTVVLPQFNQLPQKSVEAIAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRTRRSKVKRVRESLQNSLRGRIELIESYARISSMIEIEVEMETDVLAAETASNMDSITEQIEQIMELENLEERWKIQAEANDEAERLLSSQPMPLDEV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00408 573 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 572 - -
Pumo6g00408 573 Coils Coil 532 562 - -
Pumo6g00408 573 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 159 193 IPR002885 -
Pumo6g00408 573 Gene3D Tetratricopeptide repeat domain 75 203 IPR011990 GO:0005515
Pumo6g00408 573 Coils Coil 429 449 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00408 - - gmx:100781803 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00408 6 5185583 5192259 Pumo6g00408 6 5185583 5192259 ECH