Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00404 ATGGAATCCGAGAGGGAAAGTTTCGACCTCTCAGGACCGTTGCATCTAACTTATGTCTTATGGGATAATGCATATCATCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTACATTCTAGAAAGGGACAGGCAAGAAAAACGTGAAGGTCCAAATGCTCTTGCACCTCCTTGGTGGACATTCTTTCACTTTCAGCTGCTCCGTCCCCTTGTAGATGATGTTGATTCCTCCATCTTTGGTGCCATATACGAGTACAGGCCTCCATCATCTCAGTGTAATGACACTTTATATAGAAGTCCACGTTATGTGATTGCCTTTAGAGGGACTCTAACCAAATCACACTCAGTTTCTCGTGATATTGAGTTGGATATCCACTTTATCAAGCAAGGGCTTCATCAAACTTCCCGCTCTGAAATAGCTATTCAAGCTGTTCGAAACACAGTAGCAACTGTAGGTGATTCAAATGTTTGGTTGGCTGGGCACTCTCTAGGATCAGCAATGGCAATGCTCACTGGGAAAACCATGGCCAAGAATGGCATGTTCATTGAAGCTTTTCTTTTCAACCCGCCATTTGTATCTGCTCCAATTGAGAGAATTAAGGATGAGAGGGTGAAACATGGGATTCGACTTGCAGGCAGCGTGATAACGGCGGGACTCACCATTGCTATGCAAGCCAAGCAGCCAAGGGATTTATCTGTTGATCCATTTGCTGCTTTGGCTGCCTGGGTCCCAGGTTTGTTTGTGAATCCATCTGACCATATATGCTCAGAGTATATTGGATACTTTGAACATAGAAGAAAAATGGATGAGATTGGAGCAGGGGTCATTGAAAGGTTAGCAACTCAAAATTCACTTGGTGGCCTATTGATGAGTGCATTTGGGAAGGAATCTGAACCCCTTCACCTCATTCCTTCAGCTTCTCTGACAGTTAATGTTACTCCTTCGCGTGATTTCAAGGAAGCCCATGGGATTCACCAGTGGTGGAAACCAGACTTGCGGCTAGAACACAAGCTCTACAATTACAAATAG 1032 0.4438 MESERESFDLSGPLHLTYVLWDNAYHRMSVAASLVQGVYILERDRQEKREGPNALAPPWWTFFHFQLLRPLVDDVDSSIFGAIYEYRPPSSQCNDTLYRSPRYVIAFRGTLTKSHSVSRDIELDIHFIKQGLHQTSRSEIAIQAVRNTVATVGDSNVWLAGHSLGSAMAMLTGKTMAKNGMFIEAFLFNPPFVSAPIERIKDERVKHGIRLAGSVITAGLTIAMQAKQPRDLSVDPFAALAAWVPGLFVNPSDHICSEYIGYFEHRRKMDEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNVTPSRDFKEAHGIHQWWKPDLRLEHKLYNYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00404 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 342 - -
Pumo6g00404 343 SUPERFAMILY alpha/beta-Hydrolases 18 217 IPR029058 -
Pumo6g00404 343 Pfam Lipase (class 3) 139 182 IPR002921 GO:0006629
Pumo6g00404 343 Gene3D alpha/beta hydrolase 79 204 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00404 Pumo-Chr6 5151280 5154234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00404 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.895 6.76e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00404 - - gmx:100811139 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02411 8 61346622 61346990 Pumo6g00404 6 5151280 5154234 PCT