Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00396 ATGGAGATTTTCTCTGTCTTGTCGGAACCGTCCCTCGTCGCCGTCGCCGTGACTGCTCTCTGTTTCGTCTTCGCGCTCTTCTCTCTCCTCCGATCGTTCTCTCTTCCCCGGAGATTCACGCCGCCGAGGAAGCACCACTGCGATTGCGCCTCCAATTCCGACTCCTCCTCCGCTGCCGCCGCCGTGCCCTACCTCAACGGCGGAGCCCTCGAAATGCTCGAGCCCAGTCCCGTTCCGGCGCCGGCGGTGTTGGCGGAGCGGCGAACGGGGTCGTCGATGATGGAAGAACTGGTTCCGGAGATTACGACGCACGCGCTCAGTTACTTGGATTATCCGAGTCTCTGTCGCCTCTCGATGACCAATTCGTTGATGCGAAAGGCTGCGAATGATGATAATGCTTGGAAGGCCCTTTATCACAAGGACTTCACATTGGAACAAGATAGTATTACACCCACTAATGGGTGGAAGGCTTACTATGCTGCAACAAGAGCAATTGTGAATATTAATACAGAATTCTTCAACATTGTAAGAGATAAGTCTCTTCAAGCAATGAGTCGTTTTTGGCTGAATGCAGATTATGTGAAGTGCATTCATGCCTCAGGAGAACTCTTTTCCGGGTACAATGCAGTAATGCAGAGTTGGCAACTCGTATTCAGCTGGGAGCAAGGATTGAACTCTCAGGTTCGAGATGTACGTGCTCGTGTCTTGACAGACATGGCTTGGGTTACCATGAAAACATACGTTGACATGGATACGGGGCCATTCAATGTGACCAATGTTTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTCTGTGATGAATGGGGATGTGGACCATCAGATTGTGCATGGATAA 870 0.5057 MEIFSVLSEPSLVAVAVTALCFVFALFSLLRSFSLPRRFTPPRKHHCDCASNSDSSSAAAAVPYLNGGALEMLEPSPVPAPAVLAERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSITPTNGWKAYYAATRAIVNINTEFFNIVRDKSLQAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLVFSWEQGLNSQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVDHQIVHG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00396 289 SUPERFAMILY NTF2-like 160 278 IPR032710 -
Pumo6g00396 289 Gene3D - 156 285 - -
Pumo6g00396 289 Gene3D - 83 135 - -
Pumo6g00396 289 PANTHER F-BOX PROTEIN SKIP8 6 288 IPR044260 -
Pumo6g00396 289 Pfam SnoaL-like domain 166 279 IPR037401 -
Pumo6g00396 289 SUPERFAMILY F-box domain 89 178 IPR036047 GO:0005515
Pumo6g00396 289 CDD F-box_FBXL4 95 140 - -
Pumo6g00396 289 ProSiteProfiles F-box domain profile. 91 137 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00396 - - gmx:100807571 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00396 6 5081074 5084840 Pumo6g00396 6 5081074 5084840 ECH