Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00220 ATGAACAATATTTGTTGTTGTTGTTGGGTAGCATCGATGAAATTTCCCGTGTGGCGCTTCTCAAGGCCTTTTATGTCTCTCTCTTCTTCTTTTTCTTGGTCTCGCATTATGACCATTCAAAATTGTTCTTCTAATTCTAATTCTTCAGCTTCCATGTCAACGTTGGAGTCCAAAGAGAAGAATAAGGAAGTTTCACCTTGGTTAATTGTTGGCCTCGGCAATCCAGGCAAGAAGTATGCTGCCACCCGCCACAATGTGGGCTTTGAGATGGTTGATACCATAGCTGAAGCTGAAGGGATATCTATGAGCACTGTTTCCTTCAAAGCCTTATTTGGAAAAGGTTTTATAGGTGATGTACCAGTCATACTTGCAAAACCACAGACTTTTATGAACTCAAGTGGTGAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCACCGAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTGCCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTTATTAATCACTTCAAAGGGAATACTGGTTTTCCCCGTTTAAGAATTGGCATTGGACGACCTCCCGGGAAAATGGATCCTGTAGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGGGAAGAGTTGAATTTTACATTACAAGATGGATTAGAAGCTGTGCGGATTCTTTTGCTTAAGGGATTTGATAAAAGTGCGACATTTGTTAATAGTGCAAAAAAGATAGAGCAAACAGGTTGA 783 0.4061 MNNICCCCWVASMKFPVWRFSRPFMSLSSSFSWSRIMTIQNCSSNSNSSASMSTLESKEKNKEVSPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMSTVSFKALFGKGFIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPPKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELNFTLQDGLEAVRILLLKGFDKSATFVNSAKKIEQTG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00220 260 Hamap Peptidyl-tRNA hydrolase [pth]. 66 244 IPR001328 GO:0004045
Pumo6g00220 260 Pfam Peptidyl-tRNA hydrolase 68 246 IPR001328 GO:0004045
Pumo6g00220 260 NCBIfam aminoacyl-tRNA hydrolase 67 236 IPR001328 GO:0004045
Pumo6g00220 260 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 172 182 IPR018171 GO:0004045
Pumo6g00220 260 PANTHER PEPTIDYL-TRNA HYDROLASE 56 251 IPR001328 GO:0004045
Pumo6g00220 260 Gene3D - 51 254 IPR036416 GO:0004045
Pumo6g00220 260 SUPERFAMILY Peptidyl-tRNA hydrolase-like 66 251 IPR036416 GO:0004045
Pumo6g00220 260 FunFam Peptidyl-tRNA hydrolase 64 254 - -
Pumo6g00220 260 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 79 92 IPR018171 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00220 Pumo-Chr6 3015687 3019504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00220 K01056 - gmx:100526866 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00220 6 3015687 3019504 Pumo6g00220 6 3015687 3019504 ECH