Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00188 ATGGCAGGGTCTTCGATAATGGAGAACCTCTTCCAACGCACGCTGGAGGATCTGATCAAAGGCATGCGCCTCCAACTCATCGGCGAATCCACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGACCAGCACACCAAATCCACCGCCCTCCAGAAACTCTCGTACCTCTCCGCCGTGCACGGCGTCGACATGTCGTGGGCCTGCTTCCACGTGGTCGAGGTCATGTCCTCCTCCAAGTTCGCGCACAAGAGGATCGGTTACCACGCGGCGTCGCAGTCCTTCCACGACGACACTCCGGTGCTCCTCCTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGAGTTCGAGGTAAGCCTCGCCCTCGATTTGTTGTCGCGAATCGCCACGCTCGACCTCGCTCGCGATTTGACCCCCGAGGTTTTCAAATTGCTCTCCACCGCTAGGGTTTTCGTTAGGAAGAAGGCTATTGCCGTCGTTCTGAGGGTTTTCGATAAGTACCCCGACTCGGTTAGGGTTTGCTTCAAGCGTTTGGTGGAGAATCTCGAGAGTTCTGATCCTCAGGTTGTGACGGCCGTGATCGGGGTTTTCTGCGAGCTGGCTGCCAAGGATCCTAGGTCGTACCTTCCCTTGGCTCCCGAGTTTTATAGGATTTTTGTTGATTCGAAGAACAATTGGGTTTTGATTAAGGTGCTGAAGGTGTTTGCTAAGTTGGCTCCCGTGGAACCTAGGTTGGGGAAGAGGATTGTTGAGCCTGTTTGTGACCATATGAGGAGGTCTGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGATTATGAGTCGGCTGTTAAGCTCGCGGTTGAGAAGGTTAGGGAGTTCCTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGGCTGCAGGCTCTTTCGGTTGCTGCGCCCGAGCACTTGTGGGCGGTGTTGGAGAATAAGGAGGCCGTGGTTAAGTCCTTGAGTGATGATGATTCGAATATCAAGATTGAGTCTCTGCGTCTGTTGATGGCCATGGTGTCCCGAGAGCCATGTGGCAGATATCTCCAGGGTGTTGCTCAATTATGCGTTGAAGTCTGA 1137 0.54 MAGSSIMENLFQRTLEDLIKGMRLQLIGESTFISKATEEIRREIKSTDQHTKSTALQKLSYLSAVHGVDMSWACFHVVEVMSSSKFAHKRIGYHAASQSFHDDTPVLLLITNQLRKDLSSTNEFEVSLALDLLSRIATLDLARDLTPEVFKLLSTARVFVRKKAIAVVLRVFDKYPDSVRVCFKRLVENLESSDPQVVTAVIGVFCELAAKDPRSYLPLAPEFYRIFVDSKNNWVLIKVLKVFAKLAPVEPRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVREFLVDQDPNLRYLGLQALSVAAPEHLWAVLENKEAVVKSLSDDDSNIKIESLRLLMAMVSREPCGRYLQGVAQLCVEV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00188 378 Pfam Adaptin N terminal region 31 362 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pumo6g00188 378 SUPERFAMILY ARM repeat 30 369 IPR016024 -
Pumo6g00188 378 PANTHER DELTA ADAPTIN-RELATED 1 361 IPR017105 GO:0015031|GO:0030123
Pumo6g00188 378 Gene3D - 4 370 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00188 Pumo-Chr6 2292543 2293679 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00188 K12396 - gmx:100815221 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00188 6 2292543 2293679 Pumo6g00188 6 2292543 2293679 ECH