Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00168 ATGGAGGGTGCAGAGGAGGAGCTAGAAAGAAGAAGCAAGTTTCTTAAAAGCTTGATACAGAAGAAGAAAGCCATTGAGCAACAAGAGCAACATGATCACCTACAACACAACAACGTTCGTGTCAGAGCTTGTGATATGCCTCTCCCTCTTCAGAACCGTGCCTTTCGTTGTGCACGTGATCTCCTGGACTCTATGCCACCAAAGAAGCTTGATAGTAAACGCCTGGCCCTCACACTTAAGAAGGAATTTGATTCTTCGTATGGTCCAGCTTGGCACTGCATTGTGGGTACTAGTTTTGGCTCCTATGTTACTCATTCTCTTGGTGGTTTCGTGTATTTTTCCATTGACAAGGTTTATGTCCTTCTCTTCAAGACAGCTGTTGAACCATTAGACCATTCATAG 402 0.4428 MEGAEEELERRSKFLKSLIQKKKAIEQQEQHDHLQHNNVRVRACDMPLPLQNRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLDHS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00168 133 Pfam Dynein light chain type 1 39 125 IPR001372 GO:0007017|GO:0030286
Pumo6g00168 133 CDD DLC-like_DYNLL1_DYNLL2 38 125 - -
Pumo6g00168 133 FunFam Dynein light chain 28 126 - -
Pumo6g00168 133 PANTHER DYNEIN LIGHT CHAIN 36 125 IPR001372 GO:0007017|GO:0030286
Pumo6g00168 133 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 20 126 IPR037177 GO:0007017|GO:0030286
Pumo6g00168 133 SUPERFAMILY DLC 34 125 IPR037177 GO:0007017|GO:0030286
Pumo6g00168 133 SMART Dynein_light_2 34 125 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00168 Pumo-Chr6 1974452 1981638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00168 K10418 - gmx:100805980 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00168 6 1974452 1981638 Pumo6g00168 6 1974452 1981638 ECH