Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00163 ATGCCAAACGCAAACATGCTTCTCCTCTTCCTTCTCGCACTCTTCTCCGCCATGACAACCCCGTCAACCTCCGCGATCGACACCTTCATCTTCGGCGGCTGCTCCCAGCCCAAGTACACGCCCGGTTCCGCCTACGAAAACAGCGTCAACTCGCTCCTCACCTCGCTGGTCAACTCCGCCGCGTTCTCCAACTACAACAACTTCACCGTCCAGGGAACCATCGCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCACCAACGACCAGTGCTCCCGCTGCGTGGCGCGTGCGGTCACCCAACTCGGTACCCTCTGCTTCGCCTCCTGCGGCGGTGCGTTGCAGCTCGACGGCTGTTTCGTCAAGTACGACAATGCCACCTTCATCGGGGTCGAGGACAAGACCTTGGTCACCAAGAAATGTGGGCCGTCCGTTGGGTTGACCTCGGACGCGTTGACCCGGAGGGACGCTGTGCTGGCGTATTTGCAGACGTCCGATGGGGCCTATAAGACGTTCAGGACCAGCGGGTATGGGGATTTTCAGGGTGTGGCGCAGTGCACCGGGGATTTGAGTCCCAGCGAGTGCCAGGACTGTCTTTCTGATGCAATCCAACGGTCCAAAACTGAGTGCGGGCCCACTAACTGGGCGGAGATTTACTTGGCCAAGTGCTACGCGCGCTACTCCGAAGGTGGGACTCGCTCGCGTGGTAATAATAACGATGATAGCAATCACAATGATGATGAGATTGAGAAGACACTCGCTATACTAATTGGACTCATTGCTGGGGTTGCTCTAATCATCGTTTTCCTTTCCTTCTTGTCCAAGGTGTGCGAAAAGCACAAAGGTATGGTTTTCGTGGTACATACATATGTATCTAACTGTATTTTCTTTAAGTATTTGATTTATCATTGTTACAATGCATCTCTTTTCTGA 945 0.546 MPNANMLLLFLLALFSAMTTPSTSAIDTFIFGGCSQPKYTPGSAYENSVNSLLTSLVNSAAFSNYNNFTVQGTIASSDTVYGLFQCRGDLTNDQCSRCVARAVTQLGTLCFASCGGALQLDGCFVKYDNATFIGVEDKTLVTKKCGPSVGLTSDALTRRDAVLAYLQTSDGAYKTFRTSGYGDFQGVAQCTGDLSPSECQDCLSDAIQRSKTECGPTNWAEIYLAKCYARYSEGGTRSRGNNNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGMVFVVHTYVSNCIFFKYLIYHCYNASLF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00163 314 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Pumo6g00163 314 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Pumo6g00163 314 Pfam Salt stress response/antifungal 162 232 IPR002902 -
Pumo6g00163 314 FunFam Cysteine-rich repeat secretory protein 60 153 234 - -
Pumo6g00163 314 ProSiteProfiles Gnk2-homologous domain profile. 137 236 IPR002902 -
Pumo6g00163 314 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 281 - -
Pumo6g00163 314 Gene3D - 26 132 IPR038408 -
Pumo6g00163 314 Gene3D - 152 234 IPR038408 -
Pumo6g00163 314 FunFam cysteine-rich repeat secretory protein 3 26 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00163 Pumo-Chr6 1888424 1892352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00163 11 232 Receptor kinase-like Gene Family AT4G05200 24.464 4.94e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00163 - - gmx:100808107 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00163 6 1888424 1892352 Pumo6g00163 6 1888424 1892352 ECH