Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00098 ATGCGAAATCCGCACAAGAATTACATGGCAGAGAGGTACGATGATTTGAAATTGGATTTCCCTCATGAAATTTTCAGCTCCTTGGAGAGTTACCTCCCAATAGACATGCTTTTCACCTCTCGTGGCCATAAGGTTAAGTACATGCACGACATTTTGCTCGATTATTTGCCTCCAGGAACACAATACAGAGAGCAAAAGCAACGAGAATACAGACAAATGATACTATCAAATTATAAGCCTTGGCATCGTGAGATATACACTATTGATCCTACAACATTCTTTGTCCCAACGTTTCTTAAAGCAATTAATGATAATACAGAACAAAGCTTTAGACATATAATGTCTGAACCTGCTCCAGGAATTTTTACATTTAAGATGTTTCAGCCTCACTTTTGTGAGTTATTGTTATCCGAGGTAGTTGAAAATTTTGAGAAGTGGGTTAGCGTAACAAAATTTCAGCTTATACGTCCCAATACGATGAATAAATATGGTGTTGTACTTGATGACTTTGGCCTTCAAACCATGCTTAACAAGCTTATGGAAGGTTTTATTTGTCCTTTGTCAAAAGTTTTCTTTTCAGAAATTGGTGGATCAACTTTAGATTCTCATCATGCGTTTCTTGTTGAATATGGTATAGATAAAGATATTGACTTGGGTTTCCATGTTGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAACAATTTTCTGGAGGGGAATTATTTTTTCGAGGCATGCGATGCGAAAAACATGTACATACAGAAAGTCGTCCAAAGGAGACCTTTGACTATTTCCATGTCCCTGGAGAAGCTGTGCTTCATCATGGTCGTCATCGCCATGGTGCTAGGGCTACAACATCGGGTCATCGTGTCAACCTAATAATGTGGTGTAGAAGTTCTGTTTTCAGAGAGATGATAAGGTATAAAAAAGATTTCTCTAGCTGGTGTGCAGAATGCAATCAAGATAAGACAAAAAAACTGCTCCAGTCAATGGATGAGACCCAATCGGAACTGTGCAGGAGGGAAGGCGAAACAACTACATCATCTATTGATAATAAGTGGAAGTGGAAGGCTTAA 1080 0.3852 MRNPHKNYMAERYDDLKLDFPHEIFSSLESYLPIDMLFTSRGHKVKYMHDILLDYLPPGTQYREQKQREYRQMILSNYKPWHREIYTIDPTTFFVPTFLKAINDNTEQSFRHIMSEPAPGIFTFKMFQPHFCELLLSEVVENFEKWVSVTKFQLIRPNTMNKYGVVLDDFGLQTMLNKLMEGFICPLSKVFFSEIGGSTLDSHHAFLVEYGIDKDIDLGFHVDDSEVTLNVCLGKQFSGGELFFRGMRCEKHVHTESRPKETFDYFHVPGEAVLHHGRHRHGARATTSGHRVNLIMWCRSSVFREMIRYKKDFSSWCAECNQDKTKKLLQSMDETQSELCRREGETTTSSIDNKWKWKA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00098 359 Gene3D q2cbj1_9rhob like domain 124 300 - -
Pumo6g00098 359 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 9 328 - -
Pumo6g00098 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 300 IPR005123 -
Pumo6g00098 359 SMART p4hc 119 299 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00098 Pumo-Chr6 1034502 1039814 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00098 - - ccaj:109804521 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00098 6 1034502 1039814 Pumo6g00098 6 1034502 1039814 ECH