Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00083 ATGCTTTCTGTGAGGGATTTTTGGAGGCGGCATAGGAGGAAGGTTTTCGTCACTGTTGGTGTTTTAGGAAGTGGGTATTTTTTGTATAAGCTCTACGGTGCTCACAGGCATGGGGTTCAGGAACTTGAAAGAGAACTCGCAGTTCAGAGAGAAACTGAGGAGCTTATGAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAGGATGTCTGATGTAACATTGCCTCATGCTATGCACGACTTAAGTTGTCGGATCACAGAAGAGTTGGATCTTTCTCACCTTCTTGAAAGGCTAATACAAGGAAAGGGTCAGCCGAACACCCTAACGCAATCAGAGAAACTAGATTTATGGAGTAGACTCAAAATTTTAAGTTTTACAAGAATGGCATTATCAGTGTGGGCTACAACAATGCTTAGCTTATATACAAAAGTTCAAGTCAATATACTAGGAAGGCATTTATACATTGATACAGCACGAAGCCTTGTAATCTCTGATTCAGTGGAAAGTGGAGATGTGGTTGAGAGGGAAGACCAGAAGAAATTTCTAGATACTGTTGATTTTCTCTCTCAGCATGGTATGCCTGCTTTGATTTCTGATATGGAGGCAGCAACTAAAGAAGTTCTCAAAGGAAAGCAGTTGAGTACTTTCTTCAACAGCACAACACTTCATGAAACTATCATGCAGATACTCAACATCTTCATGAGCATGGGGAGTCCAAATTCCTGGATAAATGCTGAATTTGGAAGCATTGTAGAGATATCTCTGAAAGCAGTGGTGGATACACTGGTGGAGCTCATGGGGACTAAATTTAGAGGAGGAAGTGTAACTGCGGGCCTGCCACTGGCCAGAGTGTTGCCTCAAGTTGCACAGATGTGTCCTTTGCTCCTTGAAGAACCCAGCAAAAATCAGTTCATCCAAATCATTAAAAATATACAGGAGGATAAAATAGCCCAACACAAACACAGTCTGGCAGGTGCGCGCAGAGGAAAACCTTCACAGCTGTGTGTTTGTAGGGTGCAGCAAATCAAACGAACCATGGTGGATCGAAGCAACGGTGAAGTTCTAATGCTGGAAGCCCCACCGTCTTACGGTAGGACTACGAGTTCGGAAGCGGAAATCATCGACGCATTGCCTTACATCGATGACGACTACGCAGACCCCAGAGTCAAACTGGAGGTTGACCGTCTCGTCGAGGAAGAGATGCGCCGCAGCTCCAAGAAGCCCACCGATTTCCTCAAAGATTTCCCTCCTCTTCCCAACTCCAATTTCCAGAACTACCCAATGATTGCCAGAGAGTACGAACGTGTGAGAGCTGGAAGGCCTCCCGTTGCTCTTGATAGATCGCGCTACGAATTGGAAATGCCGCCCCCCAATAAAAGGAACGATGAAACTGCTTGGAAGCAAGCTCTTCATAGAGCTCAACGCCTCCTGCAATATCAGATGATGAGGATGGAAAATTTGGATTTGATGTTAAAATATGGTCCCGATACGTGGAAACAACACAACCAAAGATTGCAAGTATACTTATCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATTGAAAAAGTAAACCGTGAAAGGAAATATCATCAGCAAAACACTGCATATGAGCTTAATGCGTTGTCCATGCAATGGAAGGAGCTTTGTCAGAAGAATATAGACATCAGTGCTGCCTGTGCTTCAGTTGAAAATCGCATAAATGAACTGAAAAGAGAAGCAGCAGAAAGAGGCTGGAACTTGGAAGCTGTAACAGAAAATGGCCAATTGGCAAATTCCGAATTATGA 1797 0.4368 MLSVRDFWRRHRRKVFVTVGVLGSGYFLYKLYGAHRHGVQELERELAVQRETEELMKAQMQAHFENIQRMSDVTLPHAMHDLSCRITEELDLSHLLERLIQGKGQPNTLTQSEKLDLWSRLKILSFTRMALSVWATTMLSLYTKVQVNILGRHLYIDTARSLVISDSVESGDVVEREDQKKFLDTVDFLSQHGMPALISDMEAATKEVLKGKQLSTFFNSTTLHETIMQILNIFMSMGSPNSWINAEFGSIVEISLKAVVDTLVELMGTKFRGGSVTAGLPLARVLPQVAQMCPLLLEEPSKNQFIQIIKNIQEDKIAQHKHSLAGARRGKPSQLCVCRVQQIKRTMVDRSNGEVLMLEAPPSYGRTTSSEAEIIDALPYIDDDYADPRVKLEVDRLVEEEMRRSSKKPTDFLKDFPPLPNSNFQNYPMIAREYERVRAGRPPVALDRSRYELEMPPPNKRNDETAWKQALHRAQRLLQYQMMRMENLDLMLKYGPDTWKQHNQRLQVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDISAACASVENRINELKREAAERGWNLEAVTENGQLANSEL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00083 598 Pfam Peroxin-3 106 169 IPR006966 GO:0005778|GO:0007031
Pumo6g00083 598 Coils Coil 556 576 - -
Pumo6g00083 598 Coils Coil 39 59 - -
Pumo6g00083 598 Coils Coil 510 537 - -
Pumo6g00083 598 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 1 245 IPR006966 GO:0005778|GO:0007031
Pumo6g00083 598 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 373 579 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00083 - - gmx:100782816 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00083 6 931647 939810 Pumo6g00083 6 931647 939810 ECH