Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00079 ATGGCTGCCTCCGTGGATCCTCTGGTAGTTGGCCGCGTCATTGGTGATGTGGTTGACATGTTCATTCCTTCGGTGAACATGTCGGTGTATTTCGGCTCAAAGCATGTAACCAATGGCTGCGACATCAAACCATCCATGGCCATTAGTCCACCCAAGCTGACCCTCACTGGAAACATGGACAGCCTCTACACCCTGGTTATGACAGACCCTGATGCTCCCAGTCCCAGCGAACCAAGCATGCGCGAGTGGATACATTGGATCGTGGTTGACATACCTGGAGGGACAAACCCATTTCGCGGAAAAGAGATTGTTCCATACGTGGGACCAAGGCCACCCGTGGGAATTCACCGCTATATCTTTGTGCTGTTTCAACAGAAAGGACCTTTGGGTCTTGTGGAGCAGCCACCAACTCGTGCGAGCTTCAACACTCGCTATTTTGCGAGGCAATTGGACTTGGGCCTCCCGGTGGCCACTGTTTATTTCAACTCTCAGAAGGAACCTGCTGCTAAGAGACGCTGA 519 0.5222 MAASVDPLVVGRVIGDVVDMFIPSVNMSVYFGSKHVTNGCDIKPSMAISPPKLTLTGNMDSLYTLVMTDPDAPSPSEPSMREWIHWIVVDIPGGTNPFRGKEIVPYVGPRPPVGIHRYIFVLFQQKGPLGLVEQPPTRASFNTRYFARQLDLGLPVATVYFNSQKEPAAKRR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00079 172 FunFam Terminal flower 1 1 172 - -
Pumo6g00079 172 Pfam Phosphatidylethanolamine-binding protein 47 160 IPR008914 -
Pumo6g00079 172 CDD PEBP_euk 25 163 IPR035810 -
Pumo6g00079 172 Gene3D - 2 172 IPR036610 -
Pumo6g00079 172 SUPERFAMILY PEBP-like 3 165 IPR036610 -
Pumo6g00079 172 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 63 85 IPR001858 -
Pumo6g00079 172 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 11 166 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00079 Pumo-Chr6 878408 880281 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00079 - - gmx:100306314 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00079 6 878408 880281 Pumo6g00079 6 878408 880281 ECH