Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00063 ATGGCCATGGGCTCAATGCTGAGTCTGAGACCCCTTCTCACAACCATCTTCTTCCTCATCTTTTATGTTCCAGTGCCGAAGGTTTCAGCATCATCATCAGTGATACTCTACAACAAGTGCCCGCACCCAGTGTGGCCCGGGATCCAGCCCAGCGCAGGAAAGCCCGTTCTTGGCCGCGGAGGCTTCAAGCTCGCCCCAAACCGGGCCTACTCCCTCCAACTCCCGGCCCTCTGGTCCGGCCGCTTCTGGGGCCGCCACGGGTGCTCCTTCGACGCCTGCCGGCAGCGGCCGCTGCGCCACCGGAGACTGCGGCGGCTCCCTCTTCTGCAACGGCATCGGCGGAACCCCACCGGCCACCCTGGCCGAGTTCACCCTGGGCAACGAGCAGGACTTCTACGACGTGAGCCTTGTCGACGGCTACAACCTCCCCATCTCCATCACCCCCTTCAAGGGATCAGGAAAATGCAGCTACGCTGGCTGCGTCAGAGACCTCAACACCATGTGCCCCGTGGGCCTCCAGGTGCGGTCACGCGACAACAAGCGCGTGGTGGCCTGCAAGAGCGCTTGCTCCGCTTTCAACTCCCCCAGGTACTGCTGCACCGGCTCCTATGGAAGCCCACAGGCCTGCAAGCCCACCGTCTATTCCAAGATCTTCAAGACCGCTTGCCCCAAGGCCTACTCCTATGCCTATGA 693 0.6234 MAMGSMLSLRPLLTTIFFLIFYVPVPKVSASSSVILYNKCPHPVWPGIQPSAGKPVLGRGGFKLAPNRAYSLQLPALWSGRFWGRHGCSFDACRQRPLRHRRLRRLPLLQRHRRNPTGHPGRVHPGQRAGLLRREPCRRLQPPHLHHPLQGIRKMQLRWLRQRPQHHVPRGPPGAVTRQQARGGLQERLLRFQLPQVLLHRLLWKPTGLQAHRLFQDLQDRLPQGLLLCL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00063 230 Gene3D Thaumatin 33 102 IPR037176 -
Pumo6g00063 230 PANTHER OS03G0233200 PROTEIN 18 92 IPR001938 -
Pumo6g00063 230 SUPERFAMILY Osmotin, thaumatin-like protein 34 92 IPR037176 -
Pumo6g00063 230 Pfam Thaumatin family 38 92 IPR001938 -
Pumo6g00063 230 ProSiteProfiles Thaumatin family profile. 31 92 IPR001938 -
Pumo6g00063 230 SMART tha2 34 144 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00063 Pumo-Chr6 702854 704276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00063 1 89 Receptor kinase-like Gene Family AT5G38280 37.079 3.18e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00063 - - gmx:100784636 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00063 6 702854 704276 Pumo6g00063 6 702854 704276 ECH