Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03893 ATGGCTTACACTGCAGTTGCCATGCCTACCTCTCCAGCAGCTACCTCTGCAACTATGGACATTGCAAAAGAGCATAATGGTCTTCGCCGCTCACAATCCAGCAAAGAACTATGCACACGTTCCATTATGCGGAGGTCTTATTCTGACAACCACCTATGTTGCTCCGTCAATCGCATACAAGCCACATCAGTGCCACCAAAACTTAAGAGCAATCGATCAATGGGGATTTCCCCATTTCAATTTTCAGGTTCCATTCTTCCAAATTCACTGCGCTCCTTCTTGTTTGACCCAGAAACAACAAGCAAGGATGTAGGTGTGGAGGAGAAGGTGGTAAGTATTGAGGAAAACATGGTGGAAAGCAGCAAAGAAGAGATAGTGAATAGAGCCAACTGGGTAGAGAGGCTTATGGAAATCAAGAAACATTGGAGAAACAGACTGCCAAAAGAAAGCATGGATCCAGATGCGATATGCAACAACAATACGTATGATGAATGTGAATGTGATGGAGATGATGATGTTTGTGTTGTGAGCGAAGACGAAGATGAGCAGGAAGTGACATATGATCACGACTCATTCTCAAAATTTCTGGTTCAAGTGCCATGGTCTGATACCAAACTATACTCTCAACTTGCCTTCCTGTGCAACATGGCCTATGTAATACCCCAAATCAAGGCTACGGACTTGAGAAGATACTACAGCCTTCAATTTATAACATCTTCTTTAGAGAAGAAGGCCGAAGTGACCAAGTTGAAAGTGAAACTTGATCAAGACTCCACTCACGTTCCTATAGATGACTCAGTAGCCTCTCAAGATGTCTCAAAAATAGGCAAAGATAATACACAGAAGCCTCAAATCCAACTAGCTTATGATATTGCTGCCTCAGCAGCCTCTTATGTCCAATTACGAGCTAAGGACCTCCTGTACCGTGCTGCCAAGTCACAACAGAGTGAAAATGAAGATTCTAATGGAAGAGGAGACTCACCGCAAGAAGAGTTAGAAGGCACTTCGCGAGGTTACAAATCAGAGGTTGCAGCTTATGTTGCAGCATCCACAATGACAGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAGCAGCAAATGACCTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCGGCAATTATACTCGATGCTTTGTAATTCAGGGGTCAGACTCCCTGGCTTCTTGGCAAGCAAACCTCTTCTTTGAGCCCACCAAATTCGAGGGCACAGACGTACTTGTTCACAGAGGAATTTATGAGGCTGCAAAAGGAATATACAAGCAATTCATGCCAGAAATAATGGACCATTTGACGAGACACGGGGATCGTGCAAAGCTTCAGTTCACTGGGCACTCCCTTGGGGGTAGTCTCTCTCTTCTGGTTCATTTGATGCTATTGACTAACAAGGTTGTGAGTCCCTCCACCCTTCGACCAGTAGTGACTTTTGGCTCACCATTTGTATTCTGTGGAGGCCAACTAATAATCAATGAGCTAGGCCTGGATGAGAGCCAAATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCCTTCTCCTGTAATTACCCAAATCATGTAGCTGTAGTCCTTAAGCGCTTAAACAACTCATTTCGGTCACATCCATGTCTGCTGAAAAATAAGCTGTTGTACTCACCACTGGGTAAAATATTCATTCTCCAACCCGATGAGAAGACATCTCCTCCACATCCTTTACTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAATGTGGATACTCTCCAAGTGTTCTTAGAACCTTCCTGAATCAACCACACCCTATTGACACACTAAGTGATCCAACAGCATATGGTTCAGAAGGCACAATTCTAAGAGACCACGACTCTAGCAACTACCTTAAAGCTATCAATGGAGTCCTGAGGAAACATTCAAAGATTCTCGTTCGCAGAGTGAGGAAGCAAAGGATTAATCAGTTGTGGCCACTGCTGACATCACCATCTCCACACTCGTGGAGCCATGAACAGAACTTGGAGAGATGCAGCTTGAGGACAAAGGAGATAGTGACAGGGGTTTAA 2088 0.4459 MAYTAVAMPTSPAATSATMDIAKEHNGLRRSQSSKELCTRSIMRRSYSDNHLCCSVNRIQATSVPPKLKSNRSMGISPFQFSGSILPNSLRSFLFDPETTSKDVGVEEKVVSIEENMVESSKEEIVNRANWVERLMEIKKHWRNRLPKESMDPDAICNNNTYDECECDGDDDVCVVSEDEDEQEVTYDHDSFSKFLVQVPWSDTKLYSQLAFLCNMAYVIPQIKATDLRRYYSLQFITSSLEKKAEVTKLKVKLDQDSTHVPIDDSVASQDVSKIGKDNTQKPQIQLAYDIAASAASYVQLRAKDLLYRAAKSQQSENEDSNGRGDSPQEELEGTSRGYKSEVAAYVAASTMTAVVAAGEKEKQEAANDLQSLHSSPCEWFVCDDPGNYTRCFVIQGSDSLASWQANLFFEPTKFEGTDVLVHRGIYEAAKGIYKQFMPEIMDHLTRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGQLIINELGLDESQIHCVMMHRDIVPRAFSCNYPNHVAVVLKRLNNSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKCGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAINGVLRKHSKILVRRVRKQRINQLWPLLTSPSPHSWSHEQNLERCSLRTKEIVTGV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03893 695 MobiDBLite consensus disorder prediction 323 337 - -
Pumo5g03893 695 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 4 683 IPR043367 GO:0008970
Pumo5g03893 695 CDD Lipase_3 344 532 - -
Pumo5g03893 695 Pfam Lipase (class 3) 393 530 IPR002921 GO:0006629
Pumo5g03893 695 Gene3D alpha/beta hydrolase 329 555 IPR029058 -
Pumo5g03893 695 SUPERFAMILY alpha/beta-Hydrolases 376 567 IPR029058 -
Pumo5g03893 695 MobiDBLite consensus disorder prediction 312 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03893 Pumo-Chr5 89014084 89020036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03893 1 669 Acyl Lipid Metabolism Gene Families AT3G61680 55.193 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03893 - - gmx:100790575 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03893 5 89014084 89020036 Pumo7g00669 7 11076260 11079700 PCT