Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03856 ATGACATTGCTCTTTCCTTGTTTTGGTGGATATATGGCTAATCATTCTTTAGTTTTAGATAACACATCTGTTAGTACTGTTACTGTAGCAGAGCAGCCATTAGTCATTGGGCAAGAGTTTCCAGATGTGGAAACCTGCCGAAGAGCGCTGAAAGATATTGCCATTGCTATGCATTTTGATCTTCGGATAGTTAAGTCAGATCGCAGTCGTTTTATAGCAAAATGCTCCAAAGAAGGGTGCCCATGGCGTGTCCATGTAGCAAAGTGTCCCGGTGTTCCAACTTTTACTGTAAGAACTCTACATGGAGATCATACTTGTGAGGGAGTTCAGAACCTTCATCATCAGCAGGCTTCAGTAGGTTGGGTTGCAAGATCTGTTGAAGCTCGCATTCGAGATAATCCACAATACAAACCAAGGGAAATACTTCAAGATATTCGTGATCAGCATGGAGTTGCCGTTTCTTACATGCAAGCTTGGCGGGGGAAGGAACGTAGCATGGCTGCACTTCATGGAACATTTGAAGAGGGTTACCGTCTTCTCCCTGCTTACTGTGAACAAATAAGGAAAACCAACCCGGGTAGCATTGCATCTGTTGTTGCCACTGGACAAGAAAATTGTTTTCAACGACTGTTCATTTCCTATCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCACTTTTAGAACTTGACAGAGCACATCTTAAAGGAAAATACCTAGGTACATTGCTCTGTGCTGCTGCTGTTGACGCTGATGATGCTTTGTTTCCTTTGGCTATTGCTGTTGTTGATGCTGAAAGCGATGAAAACTGGATGTGGTTCATGTCAGAATTGCGGAAACTTCTAGGAGTAAACACAGACAACATGCCTAGACTGACAATACTGTCTGAAAGGCAAAGAGGCTTGGTGGAGGCAGTAGAAACACATTTTCCTAGTGCTTCACATGGTTTCTGTCTGCGTTATGTTAGTGAAAATTTTCGTGATACATTTAAAAACACAAAGTTGGTAAACATCTTTTGGAATGCTGTTTATGCGCTTACTGCTGCTGAATTTGAAAGCAAGATTACTGAGATGATGGAAATTTCACAAGATGTTATATCATGGTTTCAACAATTTCCTCCGTATCTTTGGGCTGTGGCATACTTTGACAGTGTTCGATATGGCCATTTCACACTTGGGGTAACAGAATTATTGTATAACTGGGCGCTTGAATGTCATGAGCTCCCCATTGTACAGATGATGGAACACATCCGCCAGCAGATGGTATCTTGGTTTAGTGATCGGCAGGATATGGGCATGAGGTGGACATCAATTCTTGTACCATCAGCTGAGAAGCGAATTTTGGAGGCAATTGCTGATGCTCATTGCTATCAAGTGCTCCGGGCAAATGAAGTTGAATTTGAAATTGTGTCAACCGAGAGAACCAATATTGTGGATATACGGAGTCGTGAGTGCTCTTGTCGCCGTTGGCAGCTGTATGGCTTACCTTGTGCCCATGCTGCTGCTGCACTTATTTCTTGTGGACACAATGCCCATATGTTTGCTGAACCATGCTTCACTGTACAAAGTTACAGAATGACCTATTCACAGATGATTAATCCTATACCAGATAAGAGCCAGTGGAGAGATCAGGGAGAAGGAGCAGAAGGTGAAGGAGGTGCAAGGGTTGATATCATGATTCGCCCACCGAAGACTCGCCGGCCACCTGGAAGGCCTAAAAAGAAGGTTCTACGAGTGGAGAACTTTAAGCGTCCCAAAAGAGTTGTTCAATGTGGTCGCTGTCATATGTTAGGACATTCTCAAAAGAAGTGCACAATGCCCATTTGA 1830 0.4322 MTLLFPCFGGYMANHSLVLDNTSVSTVTVAEQPLVIGQEFPDVETCRRALKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTVRTLHGDHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLLELDRAHLKGKYLGTLLCAAAVDADDALFPLAIAVVDAESDENWMWFMSELRKLLGVNTDNMPRLTILSERQRGLVEAVETHFPSASHGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMMEISQDVISWFQQFPPYLWAVAYFDSVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQQMVSWFSDRQDMGMRWTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQMINPIPDKSQWRDQGEGAEGEGGARVDIMIRPPKTRRPPGRPKKKVLRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03856 609 ProSiteProfiles Zinc finger SWIM-type profile. 468 509 IPR007527 GO:0008270
Pumo5g03856 609 Pfam SWIM zinc finger 475 508 IPR007527 GO:0008270
Pumo5g03856 609 SMART 26again6 484 511 IPR006564 GO:0008270
Pumo5g03856 609 MobiDBLite consensus disorder prediction 537 556 - -
Pumo5g03856 609 PANTHER POLYPROTEIN, PUTATIVE-RELATED 32 577 - -
Pumo5g03856 609 Pfam MULE transposase domain 229 326 IPR018289 -
Pumo5g03856 609 Pfam MuDR family transposase 34 97 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03856 Pumo-Chr5 88629862 88634122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03856 - - gmx:100808214 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03856 5 88629862 88634122 Pumo5g03856 5 88629862 88634122 ECH