Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03611 ATGTACCTAGATGTAGAATTACAAAGCTTAGCTAATTGCTGGGGTGAAACCTTCCACAGTTTCAGTACAACTTGTGGAAACAATTCTAGCATCAGGCTGCTTGGTTCTAGAATTTATGGTCTTCAGGGAGGACAGAGAAAGAAATGGACAAGACCTATAACTACAAATACAGAAGGCAAGGGGAGCACCAAATCAAAAAGTACAAAACATGAGATTCTGAGTGAAACCATTTTAGCTAGTGCTACAGTAAATGTAAATAAAACACAGCTAGATCAATTCCAAGAAATTCAGTATTGTGACATACAACAAGAGATTGTTGAAAATAAAGACTTGTCTAGCTTAGTTACTGTTATTGTTTTTGATATCGAGACCACAGGGCTTAGCAGAGAGAACGAAAGAATCATTGAAATTGCACTTCGAGATCTTCAGGGTGGCGAGAACAGCACTTTTCAGACTCTTGTAAACCCTCAATGCAAAGTTCCTAATTCACGTATTCATGGCATTACTACTCAAATGGTCAACAAACCTGATGTTCCAAGGATGGGGGACCTAATTCCCATTTTATTGCAATACGTTCGAAGTCGTGAGAAGCCTGGGGGATATGTGTTATTCGTAGGTCACAATGCTCGTTGTTTTGATGTACCCTTCATCATTAATGAGTTACGGCGTTATTCTACAGAGATTCCTCCTAATTGGTTGTTTTTGGACACCCTTCCTTTAGCGCGTGAACTAATGAAGTCTGGAGGAACAGCACTTTCTTCAACATCCCTTGCCGCCCTTCGTGACCTCTACGGAATTAAAGTGGATGGATCAGCTCACAGGGCTATGGTAGATGTGAACACATTGTCCTTGATTCTTCCCAAGTTGACCTTTGATCTGAAATTGACCCTATCTGGACTTGTCAAAAAATCATTCACAGAATCAGATATTATCAACTCTAAGAAGAAGAAGAATTAG 957 0.3981 MYLDVELQSLANCWGETFHSFSTTCGNNSSIRLLGSRIYGLQGGQRKKWTRPITTNTEGKGSTKSKSTKHEILSETILASATVNVNKTQLDQFQEIQYCDIQQEIVENKDLSSLVTVIVFDIETTGLSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSRIHGITTQMVNKPDVPRMGDLIPILLQYVRSREKPGGYVLFVGHNARCFDVPFIINELRRYSTEIPPNWLFLDTLPLARELMKSGGTALSSTSLAALRDLYGIKVDGSAHRAMVDVNTLSLILPKLTFDLKLTLSGLVKKSFTESDIINSKKKKN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03611 318 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 115 299 - -
Pumo5g03611 318 Gene3D - 115 297 IPR036397 GO:0003676
Pumo5g03611 318 SMART exoiiiendus 116 295 IPR013520 -
Pumo5g03611 318 SUPERFAMILY Ribonuclease H-like 114 292 IPR012337 -
Pumo5g03611 318 Pfam Exonuclease 118 282 IPR013520 -
Pumo5g03611 318 CDD DEDDh 118 286 - -
Pumo5g03611 318 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 51 314 IPR040393 GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03611 Pumo-Chr5 85585789 85589912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03611 - - gmx:100807346 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03611 5 85585789 85589912 Pumo5g03611 5 85585789 85589912 ECH