Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03587 ATGGCCATGGCATTTGAAACGAGTCGTTTTTACCTATCGCGCCCAACCGTCTCAACACGCTTCTTATTCTCCGCCAATCTCACACGACCGAAACCGGTTTCGCTTCCTTCGCGATTCTTCCATTGCCGATCGAAACGCCTCGTTTTGACGCCGAGATTCGCTGTGAAAGCCTGCGCGGTGAACGTTGAGGAGAAGAATGTCGCCGCAAAATCGGGAGAGTGGGGGAAGGTTTCGGCGGTGTTGTTCGACATGGATGGCGTGCTCTGCAACAGCGAAGAGCCGTCTAGAAGAGCCGCCGTCGATGTCTTCGCCGAAATGGGCGTCGAAGTCACCGTCGACGATTTTGTGCCGTTCATGGGAACTGGAGAAGCAAACTTTTTGGGAGGTGTTGCTTCTGTTAAGGGAGTTAAAGGATTTGACCCAGAAGCTGCAAAAAAAAGGTTTTTTGAAATATATTTGGATAAGTATGCAAAACCAGATTCTGGAATAGGATTTCCAGGTGCTCTTGAACTCATTTCTCAGTGTAAAAGCAAAGGGCTTAAAGTGGCTGTTGCTTCTAGTGCTGATTGTATAAAGGTTGATGCAAATCTAGCTGCTGCTGGTTTACCATTGTCAATGTTCGATGCAATTGTGTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTCTTAGCTGCATCGAGAATATTGAATGTGCCCCCCAATGAGTGTATTGTTATAGAAGATGCACTAGCTGGAGTGCAAGCTGCCAAAGCTGCGCAAATGAGATGCATAGCTGTAAGGACCACATTATCAGACGAGGCTCTGGAACCAGCTGGCCCAACTCTTATCCGAGATGACATAGGAAGTGTTTCACTTGATGATATTTTCAGTGGTGGCTCTGTTGGATATAATAAGAGGATGCAGGGCTCTGAAACACTTAATAATTTTGCACAGTCTTCATCTGCTGGGCTTGCTGGAGGGTTGCAGGGTTCTCGGCGAGATATACTGAGATTTGGAAGTCTGGGAATTGCTATCTCTTGCCTTTTTTTCACCATAAGTAACTGGAAGGCAATGCAATATGCTTCCCCTAAAGCAGTTTGGAATAAGTTGTTTGGTGTTACCCAGCCACCCTTGGAGCAGAAAGAAGATAACTCAAGAGATGATAGGATCCAGCAATTTGTGAACTACATATCTGATCTGGAAAGCAGGGGAAATGCTCAGATTGTTCCAGAATTTCCGTCTAAACTTGATTGGCTGAATACAGCTCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAGTTGTACTGCTGGATTTCTGGACTTATTGTTGTATAAACTGTATGCATGTGTTGCCAGACCTAGATGTTTTGGAGAAAAAATACAAAGATATGCCGTTCATTGTTGTGGGTGTTCATTCTGCAAAATTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTTCTACGCTATGGCATTTCTCACCCGGTTGTCAATGATGGAGACATGTATCTTTGGCGGAAGTTGGGTATAAACTCATGGCCAACATTTGCTATTGTTGGCCCCAATGGTAAGCTTCTTGCACAACTTGCAGGAGAAGGTCACAAGAAGGATCTAGATGATTTTGTGGAGGCTGCACTTCTGTTTTATGGAAAACAGAACATGTTGGACAATGCGCCAATTTCATTGAGTTTGGAAAAAGATAATGATCCTCGCCTTTTCACATCTCCATTAAAGTTTCCTGGAAAGCTAGCAATTGATGTCCTTAATAACAGGCTTTTTATTTCTGACAGCAACCATAATCGCATAGTGGTTACTGACCTTGATGGGAATTTTATTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGATGGTTCCTTCGATGATGCTACTTTTAACCGCCCTCAGGGCCTTGCTTATAATGCAAAGAAAAATATCCTTTATGTTGCAGACACCGAAAACCATGCTTTGAGGGAAATTGATTTTGTTAATGAGAAAGTGCGAACTCTTGCTGGAAATGGGACCAAGGGCTCTGATTATGTTGGAGGTGGAAAAGGAGACGCTCAGCTCCTCAATTCCCCTTGGGATGTCTGCTTTCATCCATTTGAAGAAAAAATCTATATTGCCATGGCTGGCCAACATCAGATTTGGGAGCACAATTTATTGGATGCAACTACAAGAGTATTTAGTGGTGATGGCTATGAAAGAAATTTAAATGGATCAAGTTCTACAAGCACATCATTTGCACAACCTTCTGGTCTTTCACTGTCTACAGATCTAAGGGAGATCTACATTGCTGATAGTGAGAGTAGTTCAATTCGAGCTATTGATCTGAAAACAGGAGGATCTCAGTTGTTAGCTGGTGGTGACCCAATGTTCCCTGACAATTTGTTTAAGTTTGGTGATCATGATGGAATAGGCTCTGAGGTACTTCTTCAACATCCATTGGGGGTTATGTGCGGAAATGATGGTGAAATTTATATTGCAGATAGCTACAATCACAAGATCAAGAAGCTAGATCCAACCAGTAAAAGAGTTAGCACCATTGCAGGGACTGGAAAAGCTGGTTTCAAAGATGGAACAGCTGTAAAAGCTCAGCTCTCTGAACCGTCAGGAATTGTTGAAGGGAACAAGGGGAGATTATTCATAGCTGACACAAACAACAGCTTAATTCGATATCTAGATTTAAACACTGATGAAACTGAACTCCGGACGTTGGAGCTTAAAGGAATTCAGCCTCCTAAACCAAAATCAAGATCTTTTAAACGTCTTAGACGACGATCATCAGCTGACACAATGCCAATTACCATTGATGCCATTTCATCAAATGAGGGAAACTTGTCAATTAAAATATCATTACCAAATGAGTATCATTTCTCAAAGGAAGCACGCAGTAGATTCAGCGTTGATATTGAACCTGAAGATGCTGTGAATATTGATCCACTTGATGGATTTCTTAGTCCAGAAGGATCTGCAACTCTTCACTTTAAGAGATCCTCTAACTCTGCTTCAATGGGAAGAATTAATTGCAAGGTTTACTATTGCAAGGAAGATGAAGTTTGTTTGTACCAGTCTTTGCTGTTTGAGGTCCCCTTCCAAGAGGGAGTTTCTAACCCTGCCAAAGCAGACGTCACTCTTGCACATTTTGTGAAACCCAAAACTTCAACCAGCAACTTACTGCAGTCAGTTGCCCCGTGA 3198 0.4275 MAMAFETSRFYLSRPTVSTRFLFSANLTRPKPVSLPSRFFHCRSKRLVLTPRFAVKACAVNVEEKNVAAKSGEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVDDFVPFMGTGEANFLGGVASVKGVKGFDPEAAKKRFFEIYLDKYAKPDSGIGFPGALELISQCKSKGLKVAVASSADCIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPPNECIVIEDALAGVQAAKAAQMRCIAVRTTLSDEALEPAGPTLIRDDIGSVSLDDIFSGGSVGYNKRMQGSETLNNFAQSSSAGLAGGLQGSRRDILRFGSLGIAISCLFFTISNWKAMQYASPKAVWNKLFGVTQPPLEQKEDNSRDDRIQQFVNYISDLESRGNAQIVPEFPSKLDWLNTAPLQFRRDLKGKVVLLDFWTYCCINCMHVLPDLDVLEKKYKDMPFIVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMYLWRKLGINSWPTFAIVGPNGKLLAQLAGEGHKKDLDDFVEAALLFYGKQNMLDNAPISLSLEKDNDPRLFTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYVGGGKGDAQLLNSPWDVCFHPFEEKIYIAMAGQHQIWEHNLLDATTRVFSGDGYERNLNGSSSTSTSFAQPSGLSLSTDLREIYIADSESSSIRAIDLKTGGSQLLAGGDPMFPDNLFKFGDHDGIGSEVLLQHPLGVMCGNDGEIYIADSYNHKIKKLDPTSKRVSTIAGTGKAGFKDGTAVKAQLSEPSGIVEGNKGRLFIADTNNSLIRYLDLNTDETELRTLELKGIQPPKPKSRSFKRLRRRSSADTMPITIDAISSNEGNLSIKISLPNEYHFSKEARSRFSVDIEPEDAVNIDPLDGFLSPEGSATLHFKRSSNSASMGRINCKVYYCKEDEVCLYQSLLFEVPFQEGVSNPAKADVTLAHFVKPKTSTSNLLQSVAP 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03587 1065 Gene3D Glutaredoxin 376 547 - -
Pumo5g03587 1065 CDD NHL-2_like 614 955 IPR045302 -
Pumo5g03587 1065 Gene3D Putative phosphatase; domain 2 90 161 IPR023198 -
Pumo5g03587 1065 FunFam NHL repeat-containing protein 2 561 717 - -
Pumo5g03587 1065 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 76 284 - -
Pumo5g03587 1065 SUPERFAMILY HAD-like 77 286 IPR036412 -
Pumo5g03587 1065 Pfam Thioredoxin-like 429 523 IPR012336 -
Pumo5g03587 1065 SMART LY_2 741 783 IPR000033 -
Pumo5g03587 1065 SMART LY_2 569 611 IPR000033 -
Pumo5g03587 1065 Pfam Haloacid dehalogenase-like hydrolase 80 263 IPR041492 -
Pumo5g03587 1065 FunFam Chloroplast protein HCF243 792 896 - -
Pumo5g03587 1065 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 102 1062 - -
Pumo5g03587 1065 ProSiteProfiles NHL repeat profile. 812 842 IPR001258 GO:0005515
Pumo5g03587 1065 FunFam NHL repeat-containing protein 2 384 548 - -
Pumo5g03587 1065 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 76 284 - -
Pumo5g03587 1065 ProSiteProfiles Thioredoxin domain profile. 366 546 IPR013766 -
Pumo5g03587 1065 CDD HAD_BPGM-like 79 265 - -
Pumo5g03587 1065 Pfam NHL repeat 632 657 IPR001258 GO:0005515
Pumo5g03587 1065 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 175 188 IPR006439 -
Pumo5g03587 1065 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 225 245 IPR006439 -
Pumo5g03587 1065 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 77 88 IPR006439 -
Pumo5g03587 1065 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 207 223 IPR006439 -
Pumo5g03587 1065 Gene3D - 560 719 IPR011042 -
Pumo5g03587 1065 Gene3D - 796 894 IPR011042 -
Pumo5g03587 1065 SUPERFAMILY Thioredoxin-like 404 542 IPR036249 -
Pumo5g03587 1065 NCBIfam HAD-IA family hydrolase 206 263 IPR006439 -
Pumo5g03587 1065 SUPERFAMILY NHL repeat 570 899 - -
Pumo5g03587 1065 Gene3D - 79 271 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03587 - - gmx:100795843 2008.8