Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03584 ATGGCAGACTTGGAAAACATGCTTCTTGAGGCAGCTGGAAGGACTAGTTCTCCAGTGAGAAAGAGACACAAGCCTAAGAACTCAAAGGCCAAACGTGAAGGTGGTGCAGCATTATCTGATGGTGGAAGTAACTCCAGAGAGGAAGACTCTGATGAGGGTGCAAGCAAGAAACCACAGAGGTATGCATCCCATGTTCCATTGAAGAAGAGATTGGACATCAGCAGAAGAGGTAATAGTAATAGTATTGACAATGACCATGGTGGGGTTGAGTTGGAGGATGGAGTTCCTGATAACAGTGAAGAATCTGATGTTGGCAGTGATCTCTACAAGAACGAAGATGACAAGCAGAACCTCGCAAATATGACAGAACTTGAAAGAGAGATGATTTTGTCTGATAGAGCAACCAAGAAATGTGAAAAGGAATTCAAAGAAAAAATGAGAGTGAAGAGGGAAAACAAAAATGCAAGTGCAAAGACTACTACTAATGCAAATTCATCTCATCATCCTTCTTCTGCCAAGGTTCGTTCCTCGGCTAGACATGCTGAGAGGACGTCTTCCAAGGGAGATGTCCTAAGTGAATTGCGCGCGAAAAGGATGAAACAACAAATCTTAGACCCTCGTGATAAATTGGGAAACGCTTCAGGAAAAGGCTCAAGTAGCAAGCAGAAACCCGGAATCACAGCAAGTCCAAGTAGCTCTAGTCAGAGTGAGAGTGGTATTCGGTCTGACAGTGAAAGAGACTCATCCGATGATGGTGGAATGGGTGACAGTGATGATGACAAGAGCATGCATGAGTCACAGATGCCAACGTTTGAGAACATAAGGGACATCACCATTAGGAGGTCAAAGCTTGTAAAGTGGTTGAATGAACCATTTTTTGAGGAGTTAATTGTTGGCTGTTTTGTGAGAATTGGCATAGGAAAGTCAGAAAGTGGACCTGTCTATAGGCTCTGCATTGTCCAGAGAGTTGATGGGGGTGACCCAAATAAGCATTACAAGGTAGAGAATAGAGTCACTCACAAGTATCTAGTTTGTGTGTGGGGCAGTGAGAACTCAGCTAAAAAGTTTCAGATGGCTGTAGTTTCAGATTCTGCACCATTGGAGAAAGAGTTCAGACAGTGGGTTAGAGAACTTGAGAGAACTTGCAGCCAGATGCCAAGTAAGATGAGTGTGTTGGAGAAGAAGGAGGCCATAAGAAGAACTAGCAAGTATGTTTATTCAGCTGCCACAGTGAAGCAAATGCTAGAGGAGAAAAAATCTGCCCCATCTAGGCCACTGAACATTGCAGTGGAGAAGGACCGGTTGAAGAACCTGTTGGAGGTAGCAAAAAGTAAGAATGATGAGGCAGAGATGGATAGTATCTTGACAAAGCTCGCAGGATTGGAAGCATCTCGTAGAACCCGGGAGAATGATGCCAAGGCTATGAGGCTGGCTGAGATGAACAGGAAGAACAAGGTTGAGAACTTCAAGATTTTGTCTGAAACAAAACAGTTGAATGCAAATTTGAAGGCTGGAGAGGAAGGCTATGATCCCTTTTCGAGGAGGTGGACGAGGTCGAGGAATTACTATGGGAAAGAAACTCAGAAGAATGAAGATAAAGGAGAAAAGGATGGTGAAGTTAGTAAGGGAGAAGAAAAAGAAGAAGAAGCTGTTACAACAAAGGTTGGTGTTGAAGTCACAGAATTGGCATTGCAAGCTGCTGCTGATGCAGGGAAGTTGATTGATACCAATGCTCCTGTGGAAGGTGGAACAGAATTACATATGCTGCATGATTTTGACTTGGCTATTTCTTTGGCTGAACTCAAGAGTTTTGGTGGACCACAGGGACTCAAAAATGGGTTTCTGGCAAGGAAACAAAAAATAGAAGCAATAGTTGGGTGCCAGGTTTCTGAGAAGGATGGGAGTAGGCATGCTCTTACATTAACTATCAGTGACTACAAGAGAAGAAGAGGACTTCTGTGA 1962 0.4363 MADLENMLLEAAGRTSSPVRKRHKPKNSKAKREGGAALSDGGSNSREEDSDEGASKKPQRYASHVPLKKRLDISRRGNSNSIDNDHGGVELEDGVPDNSEESDVGSDLYKNEDDKQNLANMTELEREMILSDRATKKCEKEFKEKMRVKRENKNASAKTTTNANSSHHPSSAKVRSSARHAERTSSKGDVLSELRAKRMKQQILDPRDKLGNASGKGSSSKQKPGITASPSSSSQSESGIRSDSERDSSDDGGMGDSDDDKSMHESQMPTFENIRDITIRRSKLVKWLNEPFFEELIVGCFVRIGIGKSESGPVYRLCIVQRVDGGDPNKHYKVENRVTHKYLVCVWGSENSAKKFQMAVVSDSAPLEKEFRQWVRELERTCSQMPSKMSVLEKKEAIRRTSKYVYSAATVKQMLEEKKSAPSRPLNIAVEKDRLKNLLEVAKSKNDEAEMDSILTKLAGLEASRRTRENDAKAMRLAEMNRKNKVENFKILSETKQLNANLKAGEEGYDPFSRRWTRSRNYYGKETQKNEDKGEKDGEVSKGEEKEEEAVTTKVGVEVTELALQAAADAGKLIDTNAPVEGGTELHMLHDFDLAISLAELKSFGGPQGLKNGFLARKQKIEAIVGCQVSEKDGSRHALTLTISDYKRRRGLL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03584 653 Pfam Plus-3 domain 273 378 IPR004343 GO:0003677
Pumo5g03584 653 Gene3D - 268 401 IPR036128 GO:0003677
Pumo5g03584 653 PANTHER UNCHARACTERIZED 231 652 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 155 172 - -
Pumo5g03584 653 FunFam RNA polymerase-associated protein RTF1 269 401 - -
Pumo5g03584 653 SMART rtf1 268 380 IPR004343 GO:0003677
Pumo5g03584 653 MobiDBLite consensus disorder prediction 213 239 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 175 205 - -
Pumo5g03584 653 SUPERFAMILY Plus3-like 270 399 IPR036128 GO:0003677
Pumo5g03584 653 ProSiteProfiles Plus3 domain profile. 268 403 IPR004343 GO:0003677
Pumo5g03584 653 MobiDBLite consensus disorder prediction 1 270 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 240 266 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 103 154 - -
Pumo5g03584 653 Coils Coil 432 452 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 523 553 - -
Pumo5g03584 653 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03584 Pumo-Chr5 85276140 85278101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03584 K15178 - gmx:100793188 1038.48