Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03568 ATGGTGAAATTCCCATTCTCATCATTTCCAATCCCAATGTCTTCCACCAACCACCACAACGGCTCCCACATAGCCAAAAAACCCAAACTCTCTTCCTCCGACTCCGTCATAACTCCGTCGGAAATCGAATCCGAATTCGCCCACCACGACGCCGCCGTCGCGCGCATCAACAACGGCAGCTTCGGGTGCTGCCCGGCCTCCATCCTCGCCGCCCAGCGCCGCTGGCAGCTGCAGTACCTCCGGCAACCCGACCACTTCTACTTCAACGACCTCAAGACCGGCATCCTCCAATCCCGAATCCTAATCAAGGACCTCGTCAACGCCGACCACGTCGACGAGATCTCCATCGTCGATAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCACACCGCCTGGAACTTCCGCGAAGGAAAGTTCCAGAAAGGCGACGTCGTCCTCATGCTCCACTACGCCTACGGCGCCGTTAAGAAATCCATGGAAGCCTACGTCACACGCGCCGGAGGTAACGTCGTCGAGGTACCGTTACCGTTCCCCGTTAACTCTAACGACGAGATCGTTTCCGAGTTTAGAAAGGCGTTAGAGAGAGGAAAGAGTAATGGGAATAGGGTTAGGTTAGCGGTGATTGATCACGTGACTTCCATGCCGTGTGTTGTTATTCCTGTTAAAGAGTTGATTCAGATTTGCAGGGAGGAAGGTGTGGACCAGGTTTTTGTTGACGCTGCACATTCCATTGGGTGCACTGATGTTGATATGAAGGAGATTGGTGCTGATTTTTATACTAGTAATTTGCACAAGTGGTTCTTTTGTCCACCTTCGATTGCGTTTTTGTATACAAGAAAGAACCCTAAGGGTAAGGGTGCTGGTTCTGATTTGCACCACCCTGTGGTGTCTCATGAATATGGCAATGGCTTGGCTGTGGAGAGTGCTTGGATTGGGACCAGGGATTATAGTGCTCAGTTTGTGGTTCCGGCCGCGGTGGAGTTTGTTAACCGGTTTGAAGGAGGGATTGAGGGGATCAAGAAGAGGAATCATGAGGCTGTTGTGGAGATGGGGGAGATGCTGGCGAAGGCGTGGGGGACTCGGCTCGGGAGTCCGGCGCATATGTGTGCTAGCATGGTTATGGTTGGCTTGCCTGCTTGTTTGGGGATTGGGAGTGATTCTGATGCCCTCAAGTTGAGGACACATTTGAGGGATGCTTTTGGGGTTGAGGTTCCGTTATACTATCGGCCGCCGAGAGAGGGGGAAGTTGGGGTGGTTACCGGATATGCGAGGATTTCTCATCAAGTGTATAACAAGGTTGATGACTATTACAAGTTTAGGGATGCGGTTAACCAGCTTGTGCAAAATGGGTTCACTTGTGGTCTTCTTTCGGATTGA 1380 0.5232 MVKFPFSSFPIPMSSTNHHNGSHIAKKPKLSSSDSVITPSEIESEFAHHDAAVARINNGSFGCCPASILAAQRRWQLQYLRQPDHFYFNDLKTGILQSRILIKDLVNADHVDEISIVDNATTAAAIVLQHTAWNFREGKFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGKSNGNRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRKNPKGKGAGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQFVVPAAVEFVNRFEGGIEGIKKRNHEAVVEMGEMLAKAWGTRLGSPAHMCASMVMVGLPACLGIGSDSDALKLRTHLRDAFGVEVPLYYRPPREGEVGVVTGYARISHQVYNKVDDYYKFRDAVNQLVQNGFTCGLLSD 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03568 459 Gene3D - 67 332 IPR015421 GO:0003824
Pumo5g03568 459 PANTHER L-CYSTEINE DESULFHYDRASE 19 454 - -
Pumo5g03568 459 Pfam Aminotransferase class-V 91 375 IPR000192 -
Pumo5g03568 459 SUPERFAMILY PLP-dependent transferases 54 449 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03568 Pumo-Chr5 85115846 85118400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03568 K22207 - gmx:100786129 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03568 5 85115846 85118400 Pumo5g03568 5 85115846 85118400 ECH