Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03504 ATGGCCACAAATGTTCGCGGTGTAGCTGCCACGATTAAGCACACAGCACGTGCCATGGTTGCCAAAAGCACCCGTGGATCCATCATATGCACCACCAGTGTGGCTGCTACTATTGGTGGAACAGGTCCTCATGGCTATACCACATCAAAACATGCTCTTCTGGGGTTGGTGAAATCAGCTTGTAGTGAACTTGGAGAATATGGAATAAGAGTTAATAGCATATCCCCTTTTGGAGTTGCCACACCTCTTGCATGCAGAGCTTTCAACTTTGAACCTGAGCAAGTTGAAGCTAATAGCTGCTCACAGGCTAATCTCAAGGGTGTTGTGTTGAAGGCTAGGCATATAGCAGAAGCAGCTTTGTTTCTTGCTTCTGATGAAGCTGTTTACATCAGTGGTCACAACTTGGTGGTGGATGGTGGCTTCTCTGTGGTTAACCGAAGTTATTCTTTCACACCTGCTTACATGTAG 468 0.4637 MATNVRGVAATIKHTARAMVAKSTRGSIICTTSVAATIGGTGPHGYTTSKHALLGLVKSACSELGEYGIRVNSISPFGVATPLACRAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDEAVYISGHNLVVDGGFSVVNRSYSFTPAYM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03504 155 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 147 - -
Pumo5g03504 155 PRINTS Glucose/ribitol dehydrogenase family signature 105 125 IPR002347 -
Pumo5g03504 155 PRINTS Glucose/ribitol dehydrogenase family signature 20 36 IPR002347 -
Pumo5g03504 155 PRINTS Glucose/ribitol dehydrogenase family signature 46 65 IPR002347 -
Pumo5g03504 155 PRINTS Glucose/ribitol dehydrogenase family signature 67 84 IPR002347 -
Pumo5g03504 155 Gene3D - 1 149 - -
Pumo5g03504 155 Pfam Enoyl-(Acyl carrier protein) reductase 1 142 - -
Pumo5g03504 155 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 144 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03504 Pumo-Chr5 84305505 84305972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03504 1 152 Miscellaneous Gene Families AT2G29150 34.211 3.62e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03504 - - gmx:100777244 293.123