Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03483 ATGGCAGCTCTAACCCCAATTTGTTCAACACCAGCACCGAGATTCAGTGGTCAACACCATGGCCATCAACTAAAATCCTCAATTTTCAATTTCACACCTCAGAAGCAAAATAGAAGAAGCATCCGAATCCGATTATCCTCTGCCTCCAACCCCAACCAGAACCAGTCTTCTCCCGGATTATACTCCGCCAAGAAATTCGACCTCACCGCATCCAACGTGGACCTCGTTCTCGACGATGTTCGCCCTTACCTCATCTCCGACGGCGGCAACGTCGACGTCGTCTCCGTGGAAGACGGCGTCATATCTCTCCGTCTCCAAGGTGCATGCGAGAGCTGCCCCAGCTCCACCACAACCATGACCATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGTGACGCCGTTAAGGACATACGCCAAGTCTACGATACCGAACCGAAGGAGACAACGGTTGAGGCGGTGAATAATCATCTTGAGATATTGCGACCGGCTATTAAGAATTACGGAGGCAGTGTAGAAGTGTTATCCGTTGAAGGCGGGGAGTGCCACGTTAAGTATGTTGGACCTGACACCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACTTTAACCACCTAG 645 0.5039 MAALTPICSTPAPRFSGQHHGHQLKSSIFNFTPQKQNRRSIRIRLSSASNPNQNQSSPGLYSAKKFDLTASNVDLVLDDVRPYLISDGGNVDVVSVEDGVISLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDTEPKETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGECHVKYVGPDTIGSGIKAAIKERFPDILNVTLTT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03483 214 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 148 212 IPR034904 -
Pumo5g03483 214 Gene3D - 65 149 IPR034904 -
Pumo5g03483 214 Pfam NifU-like domain 73 133 IPR001075 GO:0005506|GO:0016226|GO:0051536
Pumo5g03483 214 Gene3D - 150 213 IPR034904 -
Pumo5g03483 214 FunFam NifU-like protein 3, chloroplastic 65 148 - -
Pumo5g03483 214 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 71 143 IPR034904 -
Pumo5g03483 214 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 57 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03483 Pumo-Chr5 84114928 84115649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03483 K22074 - gmx:100527356 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03483 5 84114928 84115649 Pumo5g03483 5 84114928 84115649 ECH