Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03478 ATGGCTAATAGACCGGATCCAGATATTGATGATGATTTTCGTGAGCTTTATAAGGAGTACACTGGCCCCCCAGGGTCTGCTACTACAAACACGCAAGAGAGGGCAAAATCAAATAAAAGGTCTAATGCAGGGTCTGATGAAGAGGAGGAGGACGCTCGGGACCCTAATGCTGTTCCAACCGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACGGAAAGGAATTGGAAGAAAAGGAAAGAGGAGGAAATGATCTGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGCTGTCCATCTACTCTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGTCAGAGACAAAAATGTACGGGCACTTTTCACGGAGAAAGTTTTAAGCAAGATTGAAAGGGATGTTGGCTGCAAAATTAAGATGGATGAGAAGTTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTCGGGAGGAGGGTGATCAAAGAGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTCCTGTTAGTGCTCGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGAAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGACCGTATCCGGGATGACGTTCAAAAGTTTTCTAGAGGTTCTCCACAAGCTTATGGAAATAGTGGAGCTAGAGGTCATTCAAGCCGGTCAAGATCTCCAAGACATGCCCCTTATACAGGAAACTCATATAATTCATTTGACGGCCGTAATCAAAACATGGGTGCTTATAGGAATGATGGGTGGAATTCTCATAAAAGAGAATCTGGTATCCAGCCTGGCCATCAGTTTGATTACAACGCCTCCCCACAGACTTTAGAAGAATTAGAGTTGGAATATAAGAACGAGGCAGCAGAGCTAATGAGAATTCGTGACGGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTGCCTTGGTAAGGGCCACACATGCAAAACAGTGGGAAGAATTTCTTCAGCTTGATGCGCAGAGGCGTCAACAGCAGGCAGTTCAACAGATGCCTTCTGGTTATCGGGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGGTCAACTGTCAATCCTCCTCCCTATGCTAGTACTAATCTACCATTGGAATCGAGGAACAGGTTCTCAGACAACATGGAAACTTATCCTACTAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTTCAAAAGCTTACAACAGATATTAA 1389 0.4377 MANRPDPDIDDDFRELYKEYTGPPGSATTNTQERAKSNKRSNAGSDEEEEDARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPVRDKNVRALFTEKVLSKIERDVGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQRGSSSSQMTRSRSPERSPVSARFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIRDDVQKFSRGSPQAYGNSGARGHSSRSRSPRHAPYTGNSYNSFDGRNQNMGAYRNDGWNSHKRESGIQPGHQFDYNASPQTLEELELEYKNEAAELMRIRDGEEDEENFKHREAIRDLREKYMSKVALVRATHAKQWEEFLQLDAQRRQQQAVQQMPSGYRGFKQQSFPEYDGSTVNPPPYASTNLPLESRNRFSDNMETYPTRPHDNFGEFHRRGDFSKAYNRY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03478 462 MobiDBLite consensus disorder prediction 23 38 - -
Pumo5g03478 462 MobiDBLite consensus disorder prediction 228 243 - -
Pumo5g03478 462 MobiDBLite consensus disorder prediction 247 285 - -
Pumo5g03478 462 ProSiteProfiles Zinc finger CCHC-type profile. 91 106 IPR001878 GO:0003676|GO:0008270
Pumo5g03478 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Pumo5g03478 462 SUPERFAMILY Retrovirus zinc finger-like domains 78 110 IPR036875 GO:0003676|GO:0008270
Pumo5g03478 462 MobiDBLite consensus disorder prediction 1 18 - -
Pumo5g03478 462 Coils Coil 319 339 - -
Pumo5g03478 462 MobiDBLite consensus disorder prediction 176 285 - -
Pumo5g03478 462 MobiDBLite consensus disorder prediction 182 227 - -
Pumo5g03478 462 MobiDBLite consensus disorder prediction 1 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03478 - - gmx:100806099 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03478 5 84061755 84066053 Pumo5g03478 5 84061755 84066053 ECH