Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03470 ATGGGTTTCAACAAGAACATTCTCCTCATGATCGTGTCCCTCTCTTCTCTCCTCCTATCCACCCATGCCAGCATTGCCCCTTCTCCATTCCCAACCCAAACCATAGACTCCATCTTCAAGAAAGCCCACGAGGCCACCCAAGACGCGTTCAAACTACCCAACAACCCCGAGATCCTAGACTTGTGCAAAGCCACAGAGAACCCAACCCTCTGCGCCGAAACCATTGCCCCGTTCTTCCAAGGCCCATTCGACCCCATCGAGGCCCTCAAGACCGAAGTGGAGGCCACGCTGAACCAATCCTTGAAGGTCGCTGACATCATTGTCAAGTCCCTTCACGACCCCAACACCGACAAAAGGGCACGCGAGGCACTCGACATATGCTGCTCCCAATACAAGAGCATCGTGAGCACCATCAAAGAGGCCGTGGTGTTGTTGAACCAACAGAACGTGGTCGATGCTTATTACAAGTTCAGCTCCGTCATATCGGACCAGTCCAGTTGCGAAGACGCGTTTGTGGAATCTCCCGGAGTTAACATTCCCTTCCCTGAGGATTCTCTCACCGTCTTTCAGCTCGGTGGCAATTGCTTGGCCATCATGGATGGGATAGTTAATAGCCATAACACTTATTTCTTGGCTTGA 639 0.5211 MGFNKNILLMIVSLSSLLLSTHASIAPSPFPTQTIDSIFKKAHEATQDAFKLPNNPEILDLCKATENPTLCAETIAPFFQGPFDPIEALKTEVEATLNQSLKVADIIVKSLHDPNTDKRAREALDICCSQYKSIVSTIKEAVVLLNQQNVVDAYYKFSSVISDQSSCEDAFVESPGVNIPFPEDSLTVFQLGGNCLAIMDGIVNSHNTYFLA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03470 212 NCBIfam pectinesterase inhibitor domain 51 200 IPR006501 GO:0004857
Pumo5g03470 212 FunFam Invertase/pectin methylesterase inhibitor family protein 55 202 - -
Pumo5g03470 212 SMART PMEI_2 53 198 IPR006501 GO:0004857
Pumo5g03470 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 202 IPR035513 -
Pumo5g03470 212 CDD PMEI-like_2 55 202 - -
Pumo5g03470 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 199 - -
Pumo5g03470 212 Pfam Plant invertase/pectin methylesterase inhibitor 60 198 IPR006501 GO:0004857
Pumo5g03470 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03470 Pumo-Chr5 83941143 83941781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03470 - - gmx:102660506 289.656