Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03448 ATGGGGAACCAAATAGCTAGAGATGCAAGTGGGAAAATCGTTTACTGGGACGGTTCGGTTCAAGAATTCGACGAGCCACTAACGGTGGCAGAGCTCATGTTGGAGCACCCGCAACAAGTAGTGCTCGATTTCCATTCCGCTGTGAACCAGAAACGGCCAACGCCACTGCCAGCAGATGAAAAGCTAGAGATGAAGAAAACATATGTAATGGTTCCGGTGAAGCGAGGGAAGCCTGTGGTGTTGAGCAGCGAAGATAGTCGCCGCATTCTCTTGATCGTTAATTCTGCTCTGCATTCTAAGTATTTCGTTTCTTCTTCGGGCTTTCTTCCTTGGCTTGCACGGTTGTTCCACACTCAGGGAGAGGTTGCAGTGTTGCAGAGAAAGCAAGAGGTGGAGAAGGAGAACACGGAAGAGAGGTACGGTTTTTCTGAGTTTTTGCCAGAAATGATAGAAGGGAGACCAGAGTATATGACTCGGCAATTGTCGGGGAAAGGGTGGAAGCCTAGCTTGGACACCATCAAGGAGAAGAAAGTTAAGAGAAAACTGTCTCGCTGGTTATTGTTCCTCAAAGGTTTTTCTGCTGCAAAGATTTAG 594 0.4764 MGNQIARDASGKIVYWDGSVQEFDEPLTVAELMLEHPQQVVLDFHSAVNQKRPTPLPADEKLEMKKTYVMVPVKRGKPVVLSSEDSRRILLIVNSALHSKYFVSSSGFLPWLARLFHTQGEVAVLQRKQEVEKENTEERYGFSEFLPEMIEGRPEYMTRQLSGKGWKPSLDTIKEKKVKRKLSRWLLFLKGFSAAKI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03448 197 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 8 175 - -
Pumo5g03448 197 Pfam PADRE domain 1 175 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03448 Pumo-Chr5 83778767 83780033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03448 - - gmx:100527719 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03448 5 83778767 83780033 Pumo5g03448 5 83778767 83780033 ECH
Pumo5g03448 5 83778767 83780033 Pumo3g02183 3 33580192 33581052 PCT