Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03444 ATGGCGCATCGAAGAGCCAACCTGTTGTTCCTTCTATGTGCTCTCTGCTATTCTCTCATTGCCATTGCTGGAAAGAGCTATTACGATATACTTCAAGTGTCGAAGGGTGCATCGGACGAGCAGATAAAGAGAGCGTATAGGAAGCTAGCATTGAAGTACCATCCTGACAAGAACCAGGGCAATGAAGAAGCTAATAAGAAATTTGCTGAGATTAGCAATGCGTATGAAGTGTTGTCGGATAGCGAGAAGAGGAATATTTATGACAGGTATGGTGAAGAGGGTTTGAAGCAGCATGCTGCTAGTGGAGGCAGAGGTGGTGGAATGAACTTCCAAGATATTTTTAGCACTTTCTTTGGTGGGGGACCAATGGAGGAAGAAGAGAAAATTGTAAAAGGAGACGACGTGGTTGTTGATTTGGATGCAACACTTGAAGATTTGTACATGGGTGGTACCTTGAAGGTTTGGAGGGAAAAGAATGTAGTAAAGTCAGCACCTGGGAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAAGCAAATTGGGCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAACGTCAAATACGTAAGGGAGGGGTATTTCATTACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAGGTGCTATTCTATGAGGATGGAGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTTCGTATCCGTACTGCACCTCATGACCTCTTCAGAAGAGAAGGCAATGACTTGCACACTACTGTCACTATAACTCTGGTTCAAGCCCTTGTTGGTTTTGAGAAGACCATTAAACACCTAGATGAGCATCTGGTGGACATAAGCACAAAGGAAATCACAAAGCCAAAGCAGGTGAGAAAGTTCAAAGGGGAGGGTATGCCATTGCATATGAGCAACAAAAAAGGAAATCTTTACGTGACTTTTGAGGTTTTATTCCCCACGTCACTAACGGAGGAGCAGAAAACAAAGATAAAAGCAATTCTTGGTTAG 1032 0.4331 MAHRRANLLFLLCALCYSLIAIAGKSYYDILQVSKGASDEQIKRAYRKLALKYHPDKNQGNEEANKKFAEISNAYEVLSDSEKRNIYDRYGEEGLKQHAASGGRGGGMNFQDIFSTFFGGGPMEEEEKIVKGDDVVVDLDATLEDLYMGGTLKVWREKNVVKSAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHDLFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISTKEITKPKQVRKFKGEGMPLHMSNKKGNLYVTFEVLFPTSLTEEQKTKIKAILG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03444 343 Gene3D - 249 327 - -
Pumo5g03444 343 Gene3D - 128 248 - -
Pumo5g03444 343 CDD DnaJ_C 133 330 - -
Pumo5g03444 343 FunFam DnaJ protein ERDJ3B 23 127 - -
Pumo5g03444 343 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Pumo5g03444 343 SMART dnaj_3 25 83 IPR001623 -
Pumo5g03444 343 FunFam DnaJ subfamily B member 11 248 343 - -
Pumo5g03444 343 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 5 342 - -
Pumo5g03444 343 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Pumo5g03444 343 Pfam DnaJ C terminal domain 136 327 IPR002939 -
Pumo5g03444 343 Gene3D DnaJ domain 23 127 IPR036869 -
Pumo5g03444 343 Pfam DnaJ domain 27 88 IPR001623 -
Pumo5g03444 343 CDD DnaJ 27 80 IPR001623 -
Pumo5g03444 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 336 IPR008971 GO:0006457|GO:0051082
Pumo5g03444 343 PRINTS DnaJ domain signature 63 83 IPR001623 -
Pumo5g03444 343 PRINTS DnaJ domain signature 28 46 IPR001623 -
Pumo5g03444 343 PRINTS DnaJ domain signature 46 61 IPR001623 -
Pumo5g03444 343 PRINTS DnaJ domain signature 83 102 IPR001623 -
Pumo5g03444 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 130 253 IPR008971 GO:0006457|GO:0051082
Pumo5g03444 343 SUPERFAMILY Chaperone J-domain 24 121 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03444 Pumo-Chr5 83708284 83713047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03444 42 88 Miscellaneous Gene Families AT5G49580 57.447 1.40e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03444 K09517 - gmx:100799701 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03444 5 83708284 83713047 Pumo5g03444 5 83708284 83713047 ECH