Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03419 ATGTCTACGCAACCAAAGCTTGGTCGGCTTCCCAGTATCAGAGACCGAGTTGAAGACACTCTCTCTGCTCACCGTAACGAACTCATTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCCCATAGTTTGATTGATGAACTTGACAACATCCCTGGTGATGATCAAGCAACATTGGATCTTAAAAATGGCCCCTTTGGTGAAATTATCAAGGCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGTCCAAGACCTGGTGTCTGGGAATATGTCCGTGTTAATGTCTCTGAACTCAGCGTCGAGCAATTAAGCGTTTCTGAATATCTCTGCTTCAAGGAAGAACTTGTAGATGGAAAGATTAATGACAATTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCCACATTTCCTCGTCCAACCCGTTCATCATCCATCGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAATTATGTTTCGCAACAAAGATTCCTTGCAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATACAAGGGCCATGCACTGATGTTAAATGATAGAATACAAACCATTTCCAAACTTCAGACTGCATTGGCCAAGGCTGAGGATTATCTTTCTAAACTTGCACCTGATACACTCTATTCAGAGTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGCTGGGGTGATACTGCTGAACGGGTATTGGAAATGATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTGCCTATGGTATTCAATGTTGTTATATTATCTCCTCATGGCTACTTTGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAAAATGAGATGCTCCTTCGGATCAAGAAACAAGGACTTGATTTCACTCCTAGAATTCTAATTGTTACCAGATTAATACCTGATGCAAAGGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAGATCAGAGACAGGAACTCTCCGTAAATGGATCTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCGGAGTTACAAGGGTATCCTGATTTCATCATTGGGAATTACAGTGACGGGAATCTTGTTGCATCTTTATTGGCTTACAAAATGGGAGTTACACAGTGCACAATTGCGCATGCACTTGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAGTTTGAGGATAAATACCACTTTTCATGCCAATTTACTGCTGACCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACATATCAAGAAATTGCAGGAACGAAAAATACTGTAGGCCAGTATGAGAGCCACGCTGGTTTTACTCTTCCTGGACTCTATAGGGTCGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATGTATTTCCCCTACTCTGAAAAGCAGAACAGGCTTACAGCCCTGCATGGTTCAATTGAACAGCTATTATTTGATCCTGAGCAGACTGATGAACACATTGGAACACTGAAAGACAAATCAAAGCCTATAGTTTTCTCCATGGCAAGGCTAGACAGAGTAAAAAACATATCTGGATTGGTAGAATGCTTTGGTAAGAACAGCAAATTGAGGGAACTGGTAAACCTTGTTGTAGTAGCTGGTTATATTGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGATCTCGTGAAAACTTATAATTTAGATGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGGGCACGTAATGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCATTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACTTGTGGACTCCCCACATTTGCTACCTTGCCATGGTGGTCCTGCTGA 2109 0.4239 MSTQPKLGRLPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHSLIDELDNIPGDDQATLDLKNGPFGEIIKAAQEAIVLPPFVAIAVRPRPGVWEYVRVNVSELSVEQLSVSEYLCFKEELVDGKINDNFVLELDFEPFNATFPRPTRSSSIGNGVQFLNRHLSSIMFRNKDSLQPLLDFLRAHKYKGHALMLNDRIQTISKLQTALAKAEDYLSKLAPDTLYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSETGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHAGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSMYFPYSEKQNRLTALHGSIEQLLFDPEQTDEHIGTLKDKSKPIVFSMARLDRVKNISGLVECFGKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHDLVKTYNLDGDFRWIAAQTNRARNGELYRYIADTQGAFIQPAFYEAFGLTVVEAMTCGLPTFATLPWWSC 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03419 702 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 696 - -
Pumo5g03419 702 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Pumo5g03419 702 Pfam Glycosyl transferases group 1 562 696 IPR001296 GO:0016757
Pumo5g03419 702 Gene3D Glycogen Phosphorylase B; 283 529 - -
Pumo5g03419 702 FunFam Sucrose synthase 12 148 - -
Pumo5g03419 702 FunFam Sucrose synthase 149 278 - -
Pumo5g03419 702 Gene3D - 26 148 - -
Pumo5g03419 702 Gene3D - 149 278 - -
Pumo5g03419 702 NCBIfam sucrose synthase 25 696 IPR012820 GO:0005985|GO:0016157
Pumo5g03419 702 FunFam Sucrose synthase 283 564 - -
Pumo5g03419 702 Gene3D Glycogen Phosphorylase B; 530 696 - -
Pumo5g03419 702 PANTHER - 9 697 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03419 Pumo-Chr5 83338472 83343432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03419 3 696 Glycosyltransferase AT4G02280 83.285 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03419 K00695 - gmx:100793371 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03419 5 83338472 83343432 Pumo5g03419 5 83338472 83343432 ECH