Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03411 ATGGAACGCTCTACAAAACTCTTCTCGGCGTTGGTTCTCTGCGTGGTTGTGATGGCACACCAGGCAGGCGCACAGGAAATAAAAGGAAAGAGCCTAATCAACAAGGTATGCACACTCGCCCCAAGCAGAGACCTCTGCGTCGAAGTCCTCTCATCCGACCCAATCAGAAGCCCCGACGCAGACCTCAAGGACTTGGCAGTCATTTCCCTCAGGGTTGCCGCCAAGAACGCTTCCGGCATCCTCACCGACGCCAAAATGTTGATCGACGACGACAACCTCGACCCCGACGTTCAACAAGGTTTGGCCGATTGCAAGGAGACAATCTTGGACGCCGAGAGCCAGCTTGAGGACACCATTGCCGCCTTGTTGGTTGACTCCGACACCGACGCACAGGTTTGGCTCAAGGCTGCCTTGGCCGCCATTGACACCTGCGACGCCTCCATTCCCGGAGACGACGACATCCTCTCCGTTAAGAGTGCTATGTTCCGCAGACTATGCAACATTGCCATCGCCATCAGCGGCCTCTTGAACAAACCATTTAAATTCTAA 549 0.5483 MERSTKLFSALVLCVVVMAHQAGAQEIKGKSLINKVCTLAPSRDLCVEVLSSDPIRSPDADLKDLAVISLRVAAKNASGILTDAKMLIDDDNLDPDVQQGLADCKETILDAESQLEDTIAALLVDSDTDAQVWLKAALAAIDTCDASIPGDDDILSVKSAMFRRLCNIAIAISGLLNKPFKF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03411 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 176 IPR035513 -
Pumo5g03411 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 171 - -
Pumo5g03411 182 SMART PMEI_2 28 172 IPR006501 GO:0004857
Pumo5g03411 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 176 IPR035513 -
Pumo5g03411 182 Pfam Plant invertase/pectin methylesterase inhibitor 31 172 IPR006501 GO:0004857
Pumo5g03411 182 NCBIfam pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03411 Pumo-Chr5 83203385 83203968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03411 - - gmx:102667060 318.546