Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03408 ATGGAGAAAATAGAGCACAGAACGGTGAGTACGAATGGAATAAACATGCACGTGGCATCAATTGGGTCAGGCCCAGTGGTACTGTTCCTCCACGGCTTCCCGGAGCTTTGGTACTCGTGGCGCCACCAGCTTCTGTCCCTCTCCGCCGTGGGCTACCGTGCCATCGCCCCCGACCTCCGCGGCTACGGCGACACCGATGCTCCGCCCGACGCTTCCTCTTACTCCGCCCTCCACATCGTGGCGGACCTCGTTGGGCTTCTGGATGCTTTGGGCATCGAGCAAGTGTTTTTGGTGGGCCATGACTGGGGAGCCTCCATAGCGTGGCATTTCTGCTTGTTGAGGCCCGATCGTGTGAAGGCCCTGGTGAACATGAGTGTGGTGTTCCGCCCCAGAAACCCTAAACGAAAGCCCATTCAGAGCCTCAAGGCCATGATGGGCGATGATTACTATATCTGCAGGTTTCAGAAACCTGGGGAGGTTGAAGAAGAGTTTGCCCGTGCTGGTGCTGCGAGAATAATAAAGACATTTCTTGCATCTCGCGATCCACGACCACCTCGTGTGCCTAAGGAGATAGGATTTGGAGGTTCACCTAACCTTCGTATTGATCTACCTTCGTGGCTGACTGAAGAAGATGTCAATTATTATGCCAGCAAATTTGAACAGAAAGGTTTCACTGGCTGGGCTAAACTACTATCGCGCTATGGACCTAACCTGGGAGCTCACAGCAGCGTGGACTGGAGTGCAGATTAA 750 0.54 MEKIEHRTVSTNGINMHVASIGSGPVVLFLHGFPELWYSWRHQLLSLSAVGYRAIAPDLRGYGDTDAPPDASSYSALHIVADLVGLLDALGIEQVFLVGHDWGASIAWHFCLLRPDRVKALVNMSVVFRPRNPKRKPIQSLKAMMGDDYYICRFQKPGEVEEEFARAGAARIIKTFLASRDPRPPRVPKEIGFGGSPNLRIDLPSWLTEEDVNYYASKFEQKGFTGWAKLLSRYGPNLGAHSSVDWSAD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03408 249 PANTHER EPOXIDE HYDROLASE 5 242 - -
Pumo5g03408 249 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Pumo5g03408 249 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Pumo5g03408 249 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Pumo5g03408 249 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Pumo5g03408 249 SUPERFAMILY alpha/beta-Hydrolases 2 248 IPR029058 -
Pumo5g03408 249 Gene3D alpha/beta hydrolase 1 245 IPR029058 -
Pumo5g03408 249 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Pumo5g03408 249 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Pumo5g03408 249 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Pumo5g03408 249 Pfam alpha/beta hydrolase fold 25 141 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03408 Pumo-Chr5 83179496 83182190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03408 1 226 Acyl Lipid Metabolism Gene Families AT4G02340 68.584 1.07e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03408 - - gmx:100799903 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03408 5 83179496 83182190 Pumo5g03408 5 83179496 83182190 ECH