LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03403	ATGACAGAAAAGAAGCGGAAGGAGAGGGATGAAGGTAACCGCCGAAGACTGAAGCCGAAGAAGAAGCCAAACACTCAGCGGAAGAAGAGAGGCCCTCGTTTGCCCTCATCTCTGCAAAAACATCTTGACCGTTTAAACCCTACCACTTCGTTCGACAGCGTCGATTCCGATGACGACAATGACGTTTACGAGTACGAGGAAGAACGGGCCGAGGAGGAGTCCAAGAAAAATAAGCGTTACGACCCTGCTTCCGTCGTCGACGATGACTTTTCTCAAGAAGTTGAGGATGAGAATGTGCAATCTGATGATGAAAGTGAGGATGATGATTACATTGGGACAAAGAGGAGTGAAAATGCTCCCAGTGACGATTCTGGAGAGGAAGACGATGGAAGGCATGCAAGGATGCTACAAGCAATTACTGGCATGCCAAGTGAGGCTTTTGAAGAGAATAAGAAAAAAAAGATGATGAAGGACACTGTTATACCAGAGTTGTATCCAGAGTCTGAATATAATCCTAGTCGAGATGTTGTGGATGGTGATGGGCGCATTAGCATAGAGGACCTACTGAATCCTCTTCGTGAAAAGTCTGGTTATGGAAAACTTAGGAAGAGATATCAACAAATTGAGAAGAATGCTAGAACTATTCATGCGCCATTTTCAAAGGCAGTTCAAGCAAAGGTAGAGAGGAAGGCAGCATATGAAATATCAAAGAAAGATGTCACTAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCACCAACTATTTTCTTTGATGAAAATGTAGATTTAGGGTTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTGAATTTGAGAAGAAAATAGCTGCACTAGTTTATGATGACGAAGTTACGGAAGCTCATAAAAAGGATGGTTCTAAGCTTCTTGAAATGAACAAGGTCTCTATTGAGGATGAGAAGGATAGGCAAAATCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATCAAGTCCAGAACATTTCATCGTTTGTTGAAGAAAGATAGATTAAAGGCAGAAGCTTCTCAGATACAAATGGACCCTGAAGCTGCTAAAGAATATGCCATGAAACGAGAGCGTCTAAGGGCTGAGGAACGCATGACTCTGAAACACAAAAACACGGGTCGGTGGATTAAGCGTAAAATAGATCGTGGTTTACATAACCAAGATGAAGGAACTCGTGCTGCCATACATGAACAACTTCAAAGGCATGCTGAATTGACTAGAAAAATGGAGTCTATGAAGGGTAGCAGTAGTAGCAGTGAAGATACCACTGATGAGGATGAGGATGACAACTCTGCTGGTTCTGATCAGGATAGGGCTGACAAGCTTTTGGGAAAAGCTAAAGAAAAAACAATGAAAGTGTTGGAGGAAGAGGATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGTGGATTAGAGAAAAGAAAAGAGGCAGCTGTTGAAGAAGCCAACCTTGCTTTCCAAGAATATGAAGATTCCTTGAAGAAGCTGGAGAATTCTGGTGGCTCAGAAGATCCAAAAGCTGCTTCTACCAGTGGCAGAAGAGTATTTGGAACGGCTAAAGCCCAGATATCTGATACCAGTAACAAGGTAAAATCAGATAACTGCTATGATGGCAGTGATAGTGAGGATGACTTGGGGACCAGCAAAAGTGGCAACATAGAGAATGAGGGAAGCGACCTTTTGCATAAGGATGTAAACAAGGATTCGGTCATCATTCAAGAAGACACTGATACTCACCAGGAATCTGTTTTTAAGAACATTGACGAGATTATTAAAAATCCTGGGCCAAAAACTACATATGAAGTTTCCATATTTGTGTCAGATACATGGAAAAAGGCAAAAAACAAAAATGAAGACACAACTATCAAGAAGTCTCTGAAGCTTACAGGTCCAGTTAGGCAAGATATAAAGGATACTGAAAAGGAATTTGGAGAGGATAGTGATACAGATAGTGAAGGACAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTACCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCAGGGGATGATGTAGAAGATGATTTTGAAAAGGATAAGCAGGAGATCCTCAACGAAGAAAATCCTGAGCCAGAAAAGCCTCTATTACTTCCTGGCTGGGGCCAGTGGACACATGTACAGCAAAAGAAAGGGTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAAGCCCTCAAAAAGAGGAAGGATGCTCAGCTAAAAAATGTGATTATATCTGAGAAGATAGACAAGAAGGCTGAGAAACTACATACTAAATCATTGCCATTCCCTTTTACTTCCAAAGAGGTCTTTGAACAGAGCATGCGTGTGCCCATCGGACCTGAATTTAATCCAGCAACTGCAATTGGTCCTCTTAACCGGCCGGAAGTGGTGAAGAGACCAGGTGTTATTATAAAACCAATAGAGTTTGAAGAAGTGAATCCTCATGAAAAACCAGAGCAACGGAGCGGAGATAAGCGTAAGGTTAAGAAACATAACGGTAATGGTGGCAATCCCATGAAAAAGGCGAAGGTGGGAGGAAAAAGTTAA	2670	0.4176	MTEKKRKERDEGNRRRLKPKKKPNTQRKKRGPRLPSSLQKHLDRLNPTTSFDSVDSDDDNDVYEYEEERAEEESKKNKRYDPASVVDDDFSQEVEDENVQSDDESEDDDYIGTKRSENAPSDDSGEEDDGRHARMLQAITGMPSEAFEENKKKKMMKDTVIPELYPESEYNPSRDVVDGDGRISIEDLLNPLREKSGYGKLRKRYQQIEKNARTIHAPFSKAVQAKVERKAAYEISKKDVTKWQHIIQRNREAPTIFFDENVDLGFSTVGAIASEFEPRTEFEKKIAALVYDDEVTEAHKKDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDRLKAEASQIQMDPEAAKEYAMKRERLRAEERMTLKHKNTGRWIKRKIDRGLHNQDEGTRAAIHEQLQRHAELTRKMESMKGSSSSSEDTTDEDEDDNSAGSDQDRADKLLGKAKEKTMKVLEEEDEVPKSGLLSLPFMRRGLEKRKEAAVEEANLAFQEYEDSLKKLENSGGSEDPKAASTSGRRVFGTAKAQISDTSNKVKSDNCYDGSDSEDDLGTSKSGNIENEGSDLLHKDVNKDSVIIQEDTDTHQESVFKNIDEIIKNPGPKTTYEVSIFVSDTWKKAKNKNEDTTIKKSLKLTGPVRQDIKDTEKEFGEDSDTDSEGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVEDDFEKDKQEILNEENPEPEKPLLLPGWGQWTHVQQKKGLPSWMLKKHEDAQKKRAEALKKRKDAQLKNVIISEKIDKKAEKLHTKSLPFPFTSKEVFEQSMRVPIGPEFNPATAIGPLNRPEVVKRPGVIIKPIEFEEVNPHEKPEQRSGDKRKVKKHNGNGGNPMKKAKVGGKS	889

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	18	35	-	-
	Pumo5g03403	889	Pfam	Utp14 protein	134	850	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	1	17	-	-
	Pumo5g03403	889	Coils	Coil	761	781	-	-
	Pumo5g03403	889	PANTHER	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14	3	867	IPR006709	GO:0006364\|GO:0032040
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	522	592	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	850	872	-	-
	Pumo5g03403	889	Coils	Coil	506	526	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	54	68	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	108	132	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	562	576	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	542	561	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	848	889	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	1	132	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	69	86	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	663	683	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	88	107	-	-
	Pumo5g03403	889	MobiDBLite	consensus disorder prediction	429	462	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g03403	Pumo-Chr5	83126168	83133636	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03403	K14567		-	gmx:100784007	1537.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g03403	5	83126168	83133636	Pumo5g03403	5	83126168	83133636	ECH