Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03401 ATGGATTTGGAGTTTGAATATCAAGAAGAATATAGGAGGAACTCAAGGGGTGTGCAACTCTTCACTTGCAAATGGTTGCCTTTGTCTTCTCCGAAGGCACTGGTTTTCCTTTGCCATGGTTATGGCATGGAGTGCAGTCGCTTCATGAGAGAATGTGGTGTACGGCTAGCGTGTGCCAAATATGCTGTGTTCGGTATCGATTATGAAGGGCATGGACGTTCTGAAGGTGCTCGTTGTTACATAAAAAAATTCGATAACATCGTTAACGATTGTTATGACTTTTTCAAGTCAGTTAGCGAGCTCCAAGAGTATAAGGGAAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGAGCAGTGAGCCTACTTGTACATAAAAAGGACCCTTCATTCTGGGACGGTGCAGTTCTCGTCGCACCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCCGGTGGTGGTCAACATATTGACTAAAGTGGAAGATGTAATCCCAAAGTGGAAGATAGTTCCCACAAAGAATGTCATCAATTCAGCCTTCAAAGACCCTGCTAAACGAGAAAGGATAAGGAAAAACAAGTTGATATACCAGGATAAGCCCAGGTTAAAAACAGCATTAGAAATGTTGAGAATCAGCATAAGCCTTGAAGACAGCTTATATAAGGTAACTCTGCCGTTTTTTGTATTGCATGGAGAAGCAGATACAGTGACTGACCCAGAAGTAAGCAGGGCATTATATGAGCGAGCCAGTAGCAAAGATAAGACCATAAAATTGTACCCGGGAATGTGGCATGGCTTAACATCGGGAGAGACTGATGAGAACATCGAAAAAGTCTTTGCAGACATTATAATGTGGCTAGACAGGCACACGAGCAATGCCACTCAAGCTTCCCCACAACAAATTGAGACTTATAATAACTGTGGCATTGAGAGATTGGCTACAGTTGCACAATCAGCAAAGATTGCAAAGCAAACAAACGGGCGAAGAAGCTATCTTTGTGGGCTGAAAGGAAAACGCATGCTATACCACTCAGCAATTTAG 1044 0.433 MDLEFEYQEEYRRNSRGVQLFTCKWLPLSSPKALVFLCHGYGMECSRFMRECGVRLACAKYAVFGIDYEGHGRSEGARCYIKKFDNIVNDCYDFFKSVSELQEYKGKARFLYGESMGGAVSLLVHKKDPSFWDGAVLVAPMCKISEKVKPHPVVVNILTKVEDVIPKWKIVPTKNVINSAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRISISLEDSLYKVTLPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGETDENIEKVFADIIMWLDRHTSNATQASPQQIETYNNCGIERLATVAQSAKIAKQTNGRRSYLCGLKGKRMLYHSAI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03401 347 FunFam Alpha/beta-Hydrolases superfamily protein 2 294 - -
Pumo5g03401 347 Pfam Serine aminopeptidase, S33 30 270 IPR022742 -
Pumo5g03401 347 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Pumo5g03401 347 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Pumo5g03401 347 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Pumo5g03401 347 Gene3D alpha/beta hydrolase 5 300 IPR029058 -
Pumo5g03401 347 PANTHER PHOSPHOLIPASE-RELATED 11 290 - -
Pumo5g03401 347 SUPERFAMILY alpha/beta-Hydrolases 7 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03401 Pumo-Chr5 83105059 83116163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03401 48 347 Acyl Lipid Metabolism Gene Families AT2G47630 63.518 2.16e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03401 K18368 - cave:132171090 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03401 5 83105059 83116163 Pumo5g03401 5 83105059 83116163 ECH