Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03394 ATGGATGATACTACTGAAATTGAAATTGAAGAGAAGAATGTGTTCTCGAAACTAACCGACGACATCGTTCTGAAGATCTTCTACAATCTGGAAGACGATCCTCGTCACTGGGCTCGCTTAGCCTGCGTCTGCACCAAATTTTCTTCCCTTATTAGGGATTTCTGTTGGAAGATAAAGTGCTCCCGCACCATCCCCTCCGACCTCCTCTCCGCCGCCGACCCCCCTCTCTCCCTCCACAAACTCGCCGTCTGCTGCCCCGGCCTCCGCCACGCCGGCCTCCTCTTCGACACCTCCGATTTCGGCCTCGAACGCGACGTAGGACCCGACATCAACATCCCTTCCAACCCTCCTAAACCTCAATTCGATGACTCCTCTTCCTCTTCCTCTTGTTGGTCCCTTTTTGATGATCTCTACTACGACACCCTCTACGCCCCCTGCGAATCCGAGGCGCCGCGATTCGTGGAAGCCGTTAGCGCGGGCGTGGTTTCCGTTGGCGCGTGCAAGAAGCGCAAGCTCTCCCGCGCGTGGAGCTCCCACCTGGCTTCGGGAGCCTGGACCTTGAGCCGGGAGCAGGGAAGCAAGCTGCTGGCGCGTCAGTTCCGGGACGACTGCCTGTACGTGTGCGACTGGCCGGGGTGCGTGCACAAGGAGGAGAAGCGCAAGTACCGCCTCTTCCGAGGGGTTTTCAAGAACTTCAAGCGCACTAGGGTTTGGAGGACCATCCATGACGGCAACAAGAGGAAGCTCGATCTGCCGTGCGCGTTCTGCTCGTGCAAATTCACGTGGGATCTGCACTCCTCGTTTTGCTTGAGGCGGGGATTTGGGTTCCATGATGACGGGGAGCCTGTGGTGAGGGCTTATGTTTGTGAGAATGGACATGTCTCTGGGGCCTGGACCGATGTTCCCATGTACACTTGA 918 0.5719 MDDTTEIEIEEKNVFSKLTDDIVLKIFYNLEDDPRHWARLACVCTKFSSLIRDFCWKIKCSRTIPSDLLSAADPPLSLHKLAVCCPGLRHAGLLFDTSDFGLERDVGPDINIPSNPPKPQFDDSSSSSSCWSLFDDLYYDTLYAPCESEAPRFVEAVSAGVVSVGACKKRKLSRAWSSHLASGAWTLSREQGSKLLARQFRDDCLYVCDWPGCVHKEEKRKYRLFRGVFKNFKRTRVWRTIHDGNKRKLDLPCAFCSCKFTWDLHSSFCLRRGFGFHDDGEPVVRAYVCENGHVSGAWTDVPMYT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03394 305 Gene3D - 4 94 - -
Pumo5g03394 305 Pfam F-box domain 15 54 IPR001810 GO:0005515
Pumo5g03394 305 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 9 304 IPR040267 -
Pumo5g03394 305 SUPERFAMILY F-box domain 11 87 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03394 Pumo-Chr5 83042197 83043674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03394 - - gmx:100789324 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03394 5 83042197 83043674 Pumo5g03394 5 83042197 83043674 ECH