Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03390 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTCTATATCACAGTGCAATTGGCTGATTCAAAGAATGCGAAAGTGGATCTTACGCCAGAAGGTATTTTTACCTTCTCTGGCAGTGCTGGTGCTGAAGACCGTCAGTATGAGCTAAAACTGGAGCTCTTTGACAAGGTTAATGTGGAGGAGAGCAAAATCAATGTGGGAGTGCGAAGCATATTCTGTGTAGTGCAGAAGGCAGAGAATGGATGGTGGAAAAGGTTACTGCGTGGAGAAGGCAAGACTCCACATTACGTGAAGGTAGATTGGGATAAATGGGTGGATGAGGATGAAGATGATGGTACCGGTGAACTGGACTTGGGAGGGATGGATTTCTCGAAATTTGGAGGGATGGGTGCTGATGCAATGGGAGGGATGGGTGCTGATGCAATGGGAGGGATGGATTTCTCTAAATTTGGTGGGATGGGTGATGATGCAATGGATGACATTGATGAGAGTGATGATGAAGAGCAAGAAGTGTCAAAGCCTGTTGAACAAGATGCTGGCGAGGCATCAACAGAGAAAAAAGAGGCTGCTCCAAGCACATAA 594 0.4663 MSRHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGIFTFSGSAGAEDRQYELKLELFDKVNVEESKINVGVRSIFCVVQKAENGWWKRLLRGEGKTPHYVKVDWDKWVDEDEDDGTGELDLGGMDFSKFGGMGADAMGGMGADAMGGMDFSKFGGMGDDAMDDIDESDDEEQEVSKPVEQDAGEASTEKKEAAPST 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03390 197 MobiDBLite consensus disorder prediction 153 197 - -
Pumo5g03390 197 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 123 - -
Pumo5g03390 197 SUPERFAMILY HSP20-like chaperones 1 153 IPR008978 -
Pumo5g03390 197 Gene3D - 2 122 IPR008978 -
Pumo5g03390 197 Pfam CS domain 6 81 IPR007052 -
Pumo5g03390 197 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Pumo5g03390 197 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 185 IPR045250 GO:0051879
Pumo5g03390 197 CDD p23_hB-ind1_like 5 113 - -
Pumo5g03390 197 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03390 Pumo-Chr5 82956738 82959613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03390 - - ccaj:109812261 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03390 5 82956738 82959613 Pumo5g03390 5 82956738 82959613 ECH