Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03389 ATGGAAACCAGTGCGGCCATGGATGTCGAGGAGCAATCTTCACCCAACGCCAACAACGTTAAACGCTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGACGACTATGTTTTCCAAATCGTCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTGTCAACGAACGCAGTGAAACTGTATTCACCTGTGGCGGGTCAGTATTATGGAGAGTGCAAGGGTCACTCTGCAACCATTAATCAGATTTTGTTTTCGGGTCCTTCAAATCCCCATGTTTTGTGTTCGTGTTCTTCTGATGGCACTATTAGAGCTTGGGACACACGCACATTTCAGCAGGTTTCTTCCATCAATGCTGGTCCTTCTCAAGAGTTTTTCAGCTTCTGTCTTGGAGGGACTAGTGGAAATTTAGTAGCGGCCGGGTGTAAATCGCAGATACTGTTCTGGGATTGGAGAAATATGAAGCAAATTGCGTGCCTGGAGGACTCTCATGTGGATGATGTCACTCAGGTTCATTTTGTCCCTAATGAACAAGGCAAGCTGATTTCTGCCTCAGTAGATGGGTTGATCTGCACATTTGATACTACTGGAGATATCAATGATGATGATCATCTAGAATCAGTGATTAACATGGGGACTTCAATTGCAAAGGTGGGGATTTTTGGAGAGAGTTACCAGAAGCTTTGGTGTTTAACACATATTGAAACCCTGGGTATCTGGAACTGGAAAGATGGTAGAAATGAAGGAAACTTCTCAGATGCTCGTACTTTAGCTTCTGAAAGTTGGAACTTGGATCATGTTGACTATTTCATTGATTGTCACTATTCCAGAGAAGCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTACTATGGGCTACTTTCCTGTAAATTACAAAGGAGTGGCAACAATTGGAGCTGCAGAAGCAATTCTTGAAGGTGGCCACACAAGTGTTATTAGGAGTGTTTTACCCATGTCAACAATTGGAGCTGGTACTAGCCAAGGCATTTTCGGATGGACTGGTGGGGAAGATGGTCGGCTATGTTGTTGGCTCTCTGATGATTCCTCTGAATCAAATCAATCTTGGATTTCAAGCACATTGATTATGAAGCCAGAAAGAACACGCAAGAAAAATCGTCATCACCCCTACACTAGCAAATAG 1167 0.437 METSAAMDVEEQSSPNANNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSTNAVKLYSPVAGQYYGECKGHSATINQILFSGPSNPHVLCSCSSDGTIRAWDTRTFQQVSSINAGPSQEFFSFCLGGTSGNLVAAGCKSQILFWDWRNMKQIACLEDSHVDDVTQVHFVPNEQGKLISASVDGLICTFDTTGDINDDDHLESVINMGTSIAKVGIFGESYQKLWCLTHIETLGIWNWKDGRNEGNFSDARTLASESWNLDHVDYFIDCHYSREAEKLWVIGGTNAGTMGYFPVNYKGVATIGAAEAILEGGHTSVIRSVLPMSTIGAGTSQGIFGWTGGEDGRLCCWLSDDSSESNQSWISSTLIMKPERTRKKNRHHPYTSK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03389 388 PANTHER UNCHARACTERIZED 19 385 IPR039328 -
Pumo5g03389 388 Gene3D - 13 126 IPR015943 GO:0005515
Pumo5g03389 388 SUPERFAMILY WD40 repeat-like 35 351 IPR036322 GO:0005515
Pumo5g03389 388 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Pumo5g03389 388 SMART WD40_4 153 194 IPR001680 GO:0005515
Pumo5g03389 388 SMART WD40_4 66 107 IPR001680 GO:0005515
Pumo5g03389 388 SMART WD40_4 110 150 IPR001680 GO:0005515
Pumo5g03389 388 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Pumo5g03389 388 Gene3D - 127 372 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03389 K24758 - gmx:100794786 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03389 5 82951764 82955879 Pumo5g03389 5 82951764 82955879 ECH