Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03386 ATGTTAGAGAAGTGTTTGGGAGCTCAAAGGGCGCGAAGATTCCACAGAGCTCTCAGGCATTGCAAGGTCACGATCCTCTGCCTCGTCCTCACCGTCGTTGTCCTGCGCGGCACCATCGGCGCCGGAAAATTCGGCACGCCGGAGCAGGACTTCGTCGACATTCGCAACCGCTTCTATTCCCGCAAGCTCCCCGAACCCCATCGCCTCCTCGGTGAGCTCCATTCCACCACGACGTCGTTTGAAAGTTCCGATTCCAATACCAATTATAACGCCTTCGACATCAACACCATATTGGTCGACGAAACAGAAGACGAGAACAGCGAGAAACTCGACCCGCACCACCCGTATCGTCTCGGCCCCAAAATATCGAACTGGGACGTACAAAGATATCGCTGGCTTCGCGAGAATCCCAATTTCTCCAATTTCCTTCGACCCAACAAGCCCCGCGTGCTTCTCGTAACTGGGTCGTCGCCGAAACCGTGCGAGAATCCCGTTGGGGATCATTACTTGTTAAAGTCTATTAAGAACAAAATCGATTATTGTCGTTTGCATGGGATTGAGGTGTTTTACAACATGGCTCTCCTCGACGCTGAAATGGCAGGGTTTTGGGCGAAGCTTCCTTTGATAAGGAAGCTTCTTTTGTCGCACCCTGAGGTGGAGTTTCTATGGTGGATGGATAGTGATGCCATGTTCACGGACATGGCGTTTGAGGTGCCGTGGGAGAGGTATAAAGACTCCAACTTGGTGATGCATGGGTGGAATGAGATGGTGTATGATGACAAGAATTGGATTGGGTTGAACACTGGGAGTTTTTTGTTGAGGAATTGCCAGTGGTCGTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAAGGGAAGGTTAGGGATGAGGCTGGGAAAGTGCTCACGCGTGAGCTCAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCGATGGTTTATTTGCTGGCTAAGGAGAGGGACAAGTGGGGTGGGAAGGTTTATCTCGAGAGTGGTTATTACTTGCATGGTTATTGGGGGATTTTGGTCGATAGGTATGAGGAGATGATTGAGAATTATCATCCTGGTTTTGGTGACCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCGGTTGAGAGGTGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGGGATAATCAGATACTGCAGATTTATGGGTTCACGCATAAGTCCTTGGGTAGTAGGGGAGTTAAGAGAATACGTAATGAGACTAGCAATCCTCTTGAGGTCAAAGATGAACTTGGGTTGCTTCATCCAGCGTTTAAAGCAGTTGAGGTATCATAA 1368 0.4927 MLEKCLGAQRARRFHRALRHCKVTILCLVLTVVVLRGTIGAGKFGTPEQDFVDIRNRFYSRKLPEPHRLLGELHSTTTSFESSDSNTNYNAFDINTILVDETEDENSEKLDPHHPYRLGPKISNWDVQRYRWLRENPNFSNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNLVMHGWNEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKERDKWGGKVYLESGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLGSRGVKRIRNETSNPLEVKDELGLLHPAFKAVEVS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03386 455 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 442 IPR008630 GO:0016020|GO:0016757
Pumo5g03386 455 Pfam galactosyl transferase GMA12/MNN10 family 147 386 IPR008630 GO:0016020|GO:0016757
Pumo5g03386 455 FunFam xyloglucan 6-xylosyltransferase 2 146 297 - -
Pumo5g03386 455 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 146 298 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03386 Pumo-Chr5 82931947 82933590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03386 1 455 Glycosyltransferase AT3G62720 79.650 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03386 K08238 - gmx:100794266 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03386 5 82931947 82933590 Pumo5g03386 5 82931947 82933590 ECH