Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03385 ATGGCCACCAATGACCTCAAACATCGGGTCACCACCAACGACAAGAGGAAGAGCGGAGGAGGCAAACGGGACAAACGAATGGTGATGGCCAAACGCGGCATTAGGTCACTCGCCATAGCAGTTGCACTCCCACTCTCTCTCACCGTCTTATCAGCGTGCATAGGCTCCTCCTCCTCCAGTGCCCATGATGCTGCTGTCACTTCGAGAAGGCCCTTCTGGTTCCCACCCTCGTGGGCCCTACACTTGACGTGCCCAGCTTCAAGCTTCTTGATGGGGCTCGCCGCTTGGATGGTGTGGGCAGATGGGGGTTTCCACAGAAACCCCACCGCTCTTTTGCTTTACTTCACTCAGCTCCTCTTCACGGTGCTGTGGGACCCCCTTGTGTTCGCGGCTGGGGCTACACGGCTCGGCTTGATGCTTTGTGTTGGGTTGTTTGTGAGCCAGTTTGGCTGCATGCGTGTGTTTCGCCCTGTGAATCCCATCGCTGCTGATTTGGTAAAGCCTTGTTTGGCATGGGTTGCTTTTCTCTCTATTCTAAATCTTAAGCTCCTTTTTGTCTGA 561 0.5472 MATNDLKHRVTTNDKRKSGGGKRDKRMVMAKRGIRSLAIAVALPLSLTVLSACIGSSSSSAHDAAVTSRRPFWFPPSWALHLTCPASSFLMGLAAWMVWADGGFHRNPTALLLYFTQLLFTVLWDPLVFAAGATRLGLMLCVGLFVSQFGCMRVFRPVNPIAADLVKPCLAWVAFLSILNLKLLFV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03385 186 Pfam TspO/MBR family 42 184 IPR004307 GO:0016020
Pumo5g03385 186 FunFam translocator protein 2 33 186 - -
Pumo5g03385 186 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 29 184 IPR004307 GO:0016020
Pumo5g03385 186 PIRSF PBR 26 186 IPR004307 GO:0016020
Pumo5g03385 186 MobiDBLite consensus disorder prediction 1 25 - -
Pumo5g03385 186 Gene3D TspO/MBR protein 32 185 IPR038330 -
Pumo5g03385 186 CDD TSPO_MBR 69 184 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03385 Pumo-Chr5 82929124 82930628 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03385 K05770 - gmx:100785785 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03385 5 82929124 82930628 Pumo5g03385 5 82929124 82930628 ECH