Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03379 ATGGCAGCCAAGCCAGCTGAAGAACCTCCTCAAGGAGAAACCCTCAAGTACCAGACGTGGGTTTTGAAAGTATTGATCCACTGCGATGGCTGCAAAAAGAGAGTCAAGAAAATTCTTCAGGGAATTGATGGGGTTTATACAACAGAGGTTGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGACGCTGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGAATAGTTGAGCTTTGGCCAGAAAAACCACCTGAGAAAAAAGATAATAAGAAGTCTGGAAAATCCAAAAAGGGTGGTGATGCTAATAATAAGGAGAAGGAAGACCAAAATAATAGTGAACCAGTTGCTGATGGTGGTTCAAATGAGGATTCTAAAGAGGCTCCCGGTGAAGATTCTGACAAAGAAGGTGGTCATAGTGATGAATGTGAGGAAGGAGGTGGTGGTGGTGGTGGTGAAGGTGGCAAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAAAGGGGAAAACGGTGGTTCTGCATCTGCTCCTCCTAATAATGGAGGAGGAGGAGGAGGAGAAATTAGTAAAGTTGAGGCATTAGTCCCTTCAAACTTGGCCACTTCCTTGGCTCCCAAGGATCTTATTAGCCCTCCATTTCAGCATGCATATCCATATCCACATGGGTACTATTCACCTCCTCCAGCATATGGATTAAGCTATAACACAGCATATCCTATCTCTAGTGCTTCATATTATGTTGGTGCCCCTATCATGCCTATGCATGCTTACACTACTCCATACTCTAGACTGCCACCACCTCCTCCACCATCTGATCCAATCAAGCACTATGGTGATGATGAAGATAAGTATGAAAATGGTTCCTTTTGCTCCATTATGTGA 888 0.4381 MAAKPAEEPPQGETLKYQTWVLKVLIHCDGCKKRVKKILQGIDGVYTTEVDSLQHKVTVTGNVDAETLIKRLSRSGRIVELWPEKPPEKKDNKKSGKSKKGGDANNKEKEDQNNSEPVADGGSNEDSKEAPGEDSDKEGGHSDECEEGGGGGGGEGGKKKKKKKKKKNKGENGGSASAPPNNGGGGGGEISKVEALVPSNLATSLAPKDLISPPFQHAYPYPHGYYSPPPAYGLSYNTAYPISSASYYVGAPIMPMHAYTTPYSRLPPPPPPSDPIKHYGDDEDKYENGSFCSIM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03379 295 Pfam Heavy-metal-associated domain 26 76 IPR006121 GO:0046872
Pumo5g03379 295 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
Pumo5g03379 295 CDD HMA 26 80 IPR006121 GO:0046872
Pumo5g03379 295 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 11 295 - -
Pumo5g03379 295 MobiDBLite consensus disorder prediction 264 288 - -
Pumo5g03379 295 MobiDBLite consensus disorder prediction 80 191 - -
Pumo5g03379 295 Gene3D - 15 79 - -
Pumo5g03379 295 MobiDBLite consensus disorder prediction 122 145 - -
Pumo5g03379 295 MobiDBLite consensus disorder prediction 80 115 - -
Pumo5g03379 295 SUPERFAMILY HMA, heavy metal-associated domain 17 82 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03379 Pumo-Chr5 82883973 82885967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03379 - - gmx:100791626 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03379 5 82883973 82885967 Pumo5g03379 5 82883973 82885967 ECH