Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03362 ATGCTCCACCGTATCACTCACCCCTCCTCTCTTCTCCTTCTTCCTCGTTTTCTCTTCCACCAACCCTTCCCTTCTTCAAATTTCAAATTCTCACCAAAACCTCTCACACTCAAGGTCCTCTCCATGGCTTCATCTCATTCCTCCCACCACAAATACACTAATCGACTCGCTTCCGAGCAGAGCCCTTACCTTCTGCAACACGCACATAACCCTGTTGATTGGTATCCCTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCAGGCGCGACGCGCCTATCTTCTTGTCAATTGGCTACAGCACCTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGACGAAGCGGTTGCCAAGTTGCTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTTTACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGACCGTGTTTCTTTCACCTGACTTGAAACCGTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTATGGACGGCCTGGATTTAAGACTATACTTAGAAAGGTAAAAGAAGCTTGGGATAGTAAGAGGGATATGCTAATTAAGAGTGGATCATATGCAATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCAGCGGATGCATTGCGTCTGTGCTCAGAGCAGCTCGCTGGGAGCTATGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTATATCACTCCAAAAAGTTGGAGGATACGGGGAAGTTGGATGGAGCTAATGGAAGTCAGCAAATGGTTTTCTTGAGCTTGCAATGCATGGCAAAAGGCGGGATTCATGATCATATTGGAGGGGGGTTTCACAGATACAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCATTTTCTATCACAAAAGATACCTTCTATTCATATATATCACGGGATATCCTTGATTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAAGCAAAGAGGTTGCAGACATACTTGGAGAGCATGCTGCTCTTTTCGAGGAGCACTATTACATCAAGCAATCGGGTAACTGTGATCTATCTGGAATGAGTGATCCTCACAATGAATTCAAGGGAAAGAGTGTCCTGATTGAGAGAAAGGAACCTTCAGAAATTGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAATTCTGGGAGAATGCAGGCGTAAGTTGTTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCGTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCGTTGGCACTGATCCAAAGGAGTACATGAAAATTGCAGAAAAAGCAGCATTCTTTATTAGGAATCAACTTTACAGTGTGGAAACTCACAGGTTACACCACAGTTTCAGACATTCTCCATCTAAAGCTCCTGCTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAGTTTGGTGGTGGAATTAACTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTATTTCTTGATAGGTCTGGAGGTGGATATTTCAATAATACAGGAGAAGATCCTTCCATTCTCCTCCGCGTGAAGGAAGACCATGATGGGGCAGAACCCTCTGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCGGGAAGTAAGGCTGAGCATTATAAGCAAAATGCAGAACATCTATTGGCCGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCGTGTACCTTCTCGGAAGCAAGTGGTCGTGGTTGGTGAAAGGACGTCTGAGGAATTTGAAGACATGCTTGCTGCAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAAATCCCAACAACAAAGAAGAGATGGAATTTTGGGAAGTAAATAACAGCAATGTTGCTCTCATGGCGAAAAATAACTATGCAGTCAACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCCCCTGTGACTGATCATTCATCACTTGAAGCTTTGCTCTCCAAAAAACCTTCCTCTTCGTTCACATAA 2397 0.4397 MLHRITHPSSLLLLPRFLFHQPFPSSNFKFSPKPLTLKVLSMASSHSSHHKYTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLTVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWDSKRDMLIKSGSYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLAGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLDGANGSQQMVFLSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTSKEVADILGEHAALFEEHYYIKQSGNCDLSGMSDPHNEFKGKSVLIERKEPSEIASKYGMSVETYQEILGECRRKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFYFPVVGTDPKEYMKIAEKAAFFIRNQLYSVETHRLHHSFRHSPSKAPAFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDALFLDRSGGGYFNNTGEDPSILLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKQNAEHLLAVFEKRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGERTSEEFEDMLAAAHALYDPNRTVIHINPNNKEEMEFWEVNNSNVALMAKNNYAVNKVVALVCQNFTCSPPVTDHSSLEALLSKKPSSSFT 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03362 798 PIRSF UCP006402_thioredoxin 36 796 IPR024705 -
Pumo5g03362 798 SUPERFAMILY Thioredoxin-like 52 195 IPR036249 -
Pumo5g03362 798 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 43 792 IPR024705 -
Pumo5g03362 798 SUPERFAMILY Six-hairpin glycosidases 242 636 IPR008928 GO:0005975
Pumo5g03362 798 FunFam spermatogenesis-associated protein 20 524 701 - -
Pumo5g03362 798 Gene3D Glutaredoxin 51 223 - -
Pumo5g03362 798 CDD SSP411 75 197 IPR004879 -
Pumo5g03362 798 Pfam Protein of unknown function, DUF255 53 214 IPR004879 -
Pumo5g03362 798 Gene3D - 524 702 IPR012341 GO:0005975
Pumo5g03362 798 FunFam spermatogenesis-associated protein 20 51 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03362 - - gmx:100777751 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03362 5 82728606 82734171 Pumo5g03362 5 82728606 82734171 ECH