Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03352 ATGGACAAGGTGATGAGGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCACAAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCAAGAACTTGGGGTGAGTCCTGTGGTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGTTAGGATGCACTGCTCCAGTCCCAGCTGTGTTCATAGGAGGGAAGCTAATGGGATCCACCAATGAAATCATGTCCCTTCACCTAAGTGGTTCACTCACTCAGTTGCTGAAACCTTACCAGGCTTTGTCTTAA 306 0.4641 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVSPVVHEIDHDPEGREMEKALLRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPYQALS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03352 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Pumo5g03352 101 FunFam Glutaredoxin family protein 1 101 - -
Pumo5g03352 101 NCBIfam glutaredoxin-like family 4 100 IPR011905 -
Pumo5g03352 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pumo5g03352 101 Pfam Glutaredoxin 13 74 IPR002109 -
Pumo5g03352 101 Gene3D Glutaredoxin 1 101 - -
Pumo5g03352 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Pumo5g03352 101 CDD GRX_GRXh_1_2_like 13 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03352 Pumo-Chr5 82652654 82653424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03352 1 100 Miscellaneous Gene Families AT4G15660 49.000 9.53e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03352 K03676 - gmx:100499748 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03352 5 82652654 82653424 Pumo5g03352 5 82652654 82653424 ECH
Pumo5g03352 5 82652654 82653424 Pumo3g02270 3 34774844 34775706 PCT