Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03351 ATGGCTGAAGGAAAGGAGCGTATTGAGCTTAAATTTCGCATATATGATGGAACTGATATAGCACACAGTACATATCCTTTGTCTACGACAGTTGGTACCCTTAAGCAAAAGCTAGTTGCTGAGTGGCCTCAAGGCAAAACAGTTACACCCAAGTTAGTAAATGACCTAAAACTTATATATGCTGGTAAAGTTTTGGAAAATAGCAAAACTCTTGCTGATTCCAGAATAACGTTTGGTGACATCCCTGGGGGTGCTGTTACGATGCATGTTGTAGTACAACCTCCAATAACTAAAAAGAAAATAGGCAATGCCTATCCAATACCTTGTGGTCACCTTTTTAAGACATGTTTGGCTTTGTCAAATTGTTGTTTGCTTCTTTTAATGTTTGATTCATTTATAGTCATTGTCTTTGAAGTTTAA 420 0.3714 MAEGKERIELKFRIYDGTDIAHSTYPLSTTVGTLKQKLVAEWPQGKTVTPKLVNDLKLIYAGKVLENSKTLADSRITFGDIPGGAVTMHVVVQPPITKKKIGNAYPIPCGHLFKTCLALSNCCLLLLMFDSFIVIVFEV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03351 139 CDD Ubl_MUBs_plant 8 95 - -
Pumo5g03351 139 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 101 IPR040015 -
Pumo5g03351 139 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 101 IPR039540 -
Pumo5g03351 139 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Pumo5g03351 139 Gene3D - 1 101 - -
Pumo5g03351 139 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03351 Pumo-Chr5 82643770 82646198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03351 - - gmx:100785440 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03351 5 82643770 82646198 Pumo5g03351 5 82643770 82646198 ECH